Protein Alignment CG4806 and PAB7

DIOPT Version :9

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_181204.1
• Gene: PAB7 / 818238
• AraportID: AT2G36660
• Length: 609
• Species: Arabidopsis thaliana
• Alignment Length: 708
• Identity: 138/708 - (19%)
• Similarity: 230/708 - (32%)
• Gaps: 278/708 - (39%)

  Fly     2 ELKKMKSLK--DDAAE------------SQSQPETGVRKRRNP-FNTQRLK-----EEKERRQKK 46
            |.|.:.|::  .||:.            |:......:.|:.|. .|.:.::     ...:.|:..
plant    46 EFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNG 110

  Fly    47 RARLIVRNISYKSTEDSLREHFGQWGTLEDVHILKRGDGKLVGCAFVQYETINQATKAILNSNGK 111
            ...:.|:|:....|...|::.|.::|.:....:....|||..|..|||:|..:.|..||
plant   111 VGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAI------ 169

  Fly   112 ELLGRKVFVDWALGKDEYVSKNPKDEEPDEKKPKVEVKEENGDEKEVKEESDAEVGKEDESSGED 176
            :.|...:..|    |:.||.|..|
plant   170 QTLNSTIVAD----KEIYVGKFMK----------------------------------------- 189

  Fly   177 SDAESGEDEEDSGESEDEENDEDHKENKDELKSKLDIKNVKREKQISNDVQEGCTVFIKNVPFDA 241
                                             |.|  .||.|::.:|       :::||:..|.
plant   190 ---------------------------------KTD--RVKPEEKYTN-------LYMKNLDADV 212

  Fly   242 EDADLRKACRKFG-LVSYAII---NRQAVSGHSKGTAFVKFKAKESA-------------DLCLQ 289
            .:..||:...:|| :||.||.   ||..     :|.|||.|...|.|             ..||.
plant   213 SEDLLREKFAEFGKIVSLAIAKDENRLC-----RGYAFVNFDNPEDARRAAETVNGTKFGSKCLY 272

  Fly   290 AGTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAKAADGVSASDM 354
            .|...|..:     ...|.||:.|.|  .|.:|..||.| |:|
plant   273 VGRAQKKAE-----REQLLREQFKEK--HEEQKMIAKVS-NIY---------------------- 307

  Fly   355 AKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGFRPH--ECRVMREHKV 417
                         :||:|                        :|:|....|.|  :|..:...|:
plant   308 -------------VKNVN------------------------VAVTEEELRKHFSQCGTITSTKL 335

  Fly   418 TPEHPQGKSKGFGFLSFDTHQRALAALRKLNNNPNIFGTQSRPI---VAFSIEDRAV-------H 472
            ..:. :||||||||:.|.|.:.|:.|::..:.  .:|  ..:|:   :|...|||.:       :
plant   336 MCDE-KGKSKGFGFVCFSTPEEAIDAVKTFHG--QMF--HGKPLYVAIAQKKEDRKMQLQVQFGN 395

  Fly   473 KIKEKRTERSKQNNP---------------TYQNKQQERKERR---QQKRNGQETKTP--VPQAD 517
            :::.:::..|...||               .||:.....|...   ....|.:....|  |..|.
plant   396 RVEARKSSSSASVNPGTYAPLYYTNTHPGMVYQSYPLMWKSANMIGSSYPNSEAVTYPPMVANAP 460

  Fly   518 NKSKLQKHIKKLEASRAAKAEGKVAEKKQLSDVQGDFVGTAAKPGTSLKMRSKKKIVEQAKEHLK 582
            :|:: |..|.||:.: |......|.:..|:..:..||              ||       ::|.:
plant   461 SKNR-QNRIGKLDRN-AVSYVPNVYQSTQMLPLSRDF--------------SK-------QQHSR 502

  Fly   583 KVKTEKRKQKNKKIRESHLAERKANNRPKQGRKKET--DDLRPLINKYK----NMISG 634
            .....|..:|:.:.|:|...          |.:.:.  :.|.||:.|.:    |.|:|
plant   503 TYGRGKEMKKSIQQRQSETV----------GMEMQLLGELLHPLVEKLEPQLANKITG 550

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM	<2..>154	CDD:223796	34/171 (20%)
		RRM_SF	49..124	CDD:302621	19/74 (26%)
		RRM3_RBM28_like	230..306	CDD:240861	24/92 (26%)
		RRM4_RBM28_like	379..468	CDD:240862	21/93 (23%)
PAB7	NP_181204.1	PABP-1234	24..582	CDD:130689	138/708 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910