DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4806 and TRA2B

DIOPT Version :10

Sequence 1:NP_611955.2 Gene:CG4806 / 37948 FlyBaseID:FBgn0260456 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_004584.1 Gene:TRA2B / 6434 HGNCID:10781 Length:288 Species:Homo sapiens


Alignment Length:171 Identity:43/171 - (25%)
Similarity:74/171 - (43%) Gaps:47/171 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KDDA----AESQSQPETGVRKRRNP---FNTQRLKEEKERRQKKRAR------------------ 49
            |:|:    ::|:|:.|:..|.||:.   :...|.:....||.:.|:.                  
Human    40 KEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTR 104

  Fly    50 ---------------LIVRNISYKSTEDSLREHFGQWGTLEDVHIL-KRGDGKLVGCAFVQYETI 98
                           |.|..:|..:||..|||.|.::|.:.||.|: .:...:..|.|||.:|.:
Human   105 RRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENV 169

  Fly    99 NQATKAILNSNGKELLGRKVFVDWALGKDEYVSKNPKDEEP 139
            :.|.:|...:||.||.||::.||::      ::|.|....|
Human   170 DDAKEAKERANGMELDGRRIRVDFS------ITKRPHTPTP 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4806NP_611955.2 RRM2_RBM28_like 49..124 CDD:409848 28/108 (26%)
RRM3_Nop4p 229..312 CDD:410077
RRM4_RBM28_like 379..468 CDD:409850
PTZ00121 <473..>622 CDD:173412
TRA2BNP_004584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114 12/73 (16%)
RRM_TRA2 117..196 CDD:409798 28/84 (33%)
Linker 193..230 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..225 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288
Blue background indicates that the domain is not in the aligned region.

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