Protein Alignment CG4806 and Rbm34

DIOPT Version :10

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_766350.2
• Gene: Rbm34 / 52202
• MGIID: 1098653
• Length: 442
• Species: Mus musculus
• Alignment Length: 548
• Identity: 115/548 - (20%)
• Similarity: 193/548 - (35%)
• Gaps: 164/548 - (29%)

  Fly    83 GDGKLVGCAFVQYETINQATKAIL-------NSNGK--------ELLGRKVF--VDWALGKDEYV 130
            |||  |.||...| .:.|...::.       ...|:        |.....||  |.....|...:
Mouse    21 GDG--VSCAASDY-LVGQVADSLRGGPRPPGGGTGRLAALFSTAEPSAPPVFVPVPQETSKKRKL 82

  Fly   131 SKNPKDEEPDEKKPKVEVKEENGDEKEVKEESDAEVGKED-ESSGEDSDAESGEDEEDSGESEDE 194
            ..:..|||....:.|..|.:|...:.:||:.|||:....: ||:...:|.|. |..:|.|:....
Mouse    83 DDDDDDEEESVSQTKKPVLQEPSRKVKVKKLSDADKRLANRESALASADLEE-ELHQDQGQGRRR 146

  Fly   195 ENDEDHKENKDEL-------------KSKLDIKNVKREKQISNDVQEGCTVFIKNVPFDAEDADL 246
            .:....|....|.             ::|:.:.  ..|:::.|:    .|||:.|:|.......|
Mouse   147 RSQSRGKVADGEALDVALSLAKDGGQRTKIPVN--PEEERLKNE----RTVFVGNLPVTCNKKKL 205

  Fly   247 RKACRKFGLVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQAGTEFKLMDEVLDP-HPALSRE 310
            :...:::|.|.                 .|:|::...|:     ||..|.:..:... ||
Mouse   206 KSFFKEYGQVE-----------------SVRFRSVMPAE-----GTLTKKLAAIKRKFHP----- 243

  Fly   311 EMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAKAADGVS-----ASDMAKRHELEQVKTQVLKN 370
            :.||..:....||::       .|.:.|...||:.|:|..     ||:.|.|
Mouse   244 DQKSINAYVVFKDES-------AAAKALQRNGAQIAEGFRIRVDLASETASR------------- 288

  Fly   371 LNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGFRPHECRVMREHKVTPEHPQGKSKGFGFLSFD 435
                 .:..:.:.|||...::..|::..|        :|..:...::......|..:|||::.|:
Mouse   289 -----DKRSVFVGNLPYKIEDSALEEHFL--------DCGSIVAVRIVRNPLTGVGRGFGYVLFE 340

  Fly   436 THQRALAALRKLNNNPNIFGTQSRPIVAFSIEDRAVHKIKEKRTERSKQNNPTYQNKQQERKERR 500
            .......|| ||||: .:.|.:.|.:       |:|:|      |:.||.|
Mouse   341 NTDAVHLAL-KLNNS-ELMGRKLRVM-------RSVNK------EKLKQQN-------------- 376

  Fly   501 QQKRNGQETKTPVPQADNKSKLQKHIKKLEASRAAKAEGKVAEKKQLSDVQGDFVGTAAKPGTSL 565
                            .|.|..:..||..:.......|||...|:.....:..|:|..|     :
Mouse   377 ----------------SNPSLKKDVIKPKQRLNFTSKEGKFHSKEGKFHSKNAFIGEKA-----V 420

  Fly   566 KMRSKKKIVEQAKEHLKKVKTEK-RKQK 592
            .|:.||      |...|||:.:| |||:
Mouse   421 LMKKKK------KGQKKKVQMKKPRKQQ 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM2_RBM28_like	49..124	CDD:409848	13/57 (23%)
		RRM3_Nop4p	229..312	CDD:410077	16/83 (19%)
		RRM4_RBM28_like	379..468	CDD:409850	19/88 (22%)
		PTZ00121	<473..>622	CDD:173412	27/121 (22%)
Rbm34	NP_766350.2	RRM1_RBM34	189..280	CDD:409828	26/124 (21%)
		RRM2_RBM34	292..364	CDD:409829	19/81 (23%)