DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4806 and RBMX2

DIOPT Version :10

Sequence 1:NP_611955.2 Gene:CG4806 / 37948 FlyBaseID:FBgn0260456 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_057108.2 Gene:RBMX2 / 51634 HGNCID:24282 Length:322 Species:Homo sapiens


Alignment Length:257 Identity:60/257 - (23%)
Similarity:106/257 - (41%) Gaps:64/257 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NPFNTQRLKEEKERRQ---------------KKRARLIVRNISYKSTEDSLREHFGQWGTLEDVH 78
            ||....:|..|...|:               |..|.:.:..:.|:.||..:...|.|:|.:.:::
Human     2 NPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNIN 66

  Fly    79 ILK-RGDGKLVGCAFVQYETINQATKAILNSNGKELLGRKVFVD----WALGKDE---------- 128
            ::: :..||..|..|:.||.......|:.|.||.::.||.:.||    :...||.          
Human    67 LVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQL 131

  Fly   129 ------------YVSKNPKDEEPDEKKPKVEVKEENGDEKEVKEESDAEVGKEDESSG------- 174
                        .:|::.:||:| .||.|.:.||:...:|| ||::|.||..|..||.       
Human   132 QEKGCGARTPSPSLSESSEDEKP-TKKHKKDKKEKKKKKKE-KEKADREVQAEQPSSSSPRRKTV 194

  Fly   175 EDSDAESGEDEEDSGESEDEENDEDHKENK------------DELKSKLDIKNVKREKQISN 224
            ::.| ::|..:..|..||..:..|..:..|            ::|:.:|..:..|.|.:.|:
Human   195 KEKD-DTGPKKHSSKNSERAQKSEPREGQKLPKSRTAYSGGAEDLERELKKEKPKHEHKSSS 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4806NP_611955.2 RRM2_RBM28_like 49..124 CDD:409848 20/79 (25%)
RRM3_Nop4p 229..312 CDD:410077
RRM4_RBM28_like 379..468 CDD:409850
PTZ00121 <473..>622 CDD:173412
RBMX2NP_057108.2 RRM_ist3_like 27..115 CDD:409845 22/87 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..322 31/125 (25%)
Blue background indicates that the domain is not in the aligned region.

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