Protein Alignment CG4806 and rbm34

DIOPT Version :10

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_001004890.1
• Gene: rbm34 / 448232
• XenbaseID: XB-GENE-5895036
• Length: 412
• Species: Xenopus tropicalis
• Alignment Length: 501
• Identity: 106/501 - (21%)
• Similarity: 167/501 - (33%)
• Gaps: 207/501 - (41%)

  Fly   142 KKPKVEVKE-ENGDEKEVKEES--DAEVGKEDESSGEDSDAESGEDEEDSGESEDEENDEDHKEN 203
            |.||.::.| |..|.|:..:|:  .|:|.||.|.|..:...   .|.|.|..:.|||....:..:
 Frog    70 KIPKRKLPEAEGADVKKACKETVVKAKVTKEKELSVSEKKL---ADREQSLANADEEETRKNVIS 131

  Fly   204 KDELKSK----LDIKNV----------KREKQISNDVQEGCTVFIKNVPFDAEDADLRKACRKFG 254
            |::||||    ||...|          :.|::|.|.    .|||:.|:|.|.....|:...::||
 Frog   132 KEKLKSKKNQSLDDDGVVVQPRKRKVNRAEERIKNK----RTVFVGNLPADYTKQMLKSLFKEFG 192

  Fly   255 LV-----------------SYAIINRQAVSGHSKGTAFVKFKAKESADLCL-----QAGTEFKLM 297
            .:                 ..|.|.|:.........|::.||.:.||...|     :.|:.|.:
 Frog   193 HIESMRFRSVARAEANLSRKVAAIQRKVHPKRKNINAYIVFKDESSASQALKRNGAEVGSGFHI- 256

  Fly   298 DEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAKAADGVSASDMAKRHELEQ 362
                       |.::.||:|..:.|..|
 Frog   257 -----------RVDIASKRSSHDNKRSA------------------------------------- 273

  Fly   363 VKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGFRPH--EC------RVMREHKVTP 419
                              .|.|||...:.|.:          |.|  ||      |::|:.|.
 Frog   274 ------------------FIGNLPYEIEEEAV----------RDHFSECGKVQGVRIIRDQKT-- 308

  Fly   420 EHPQGKSKGFGFLSFDTHQRALAALRKLNNNPNIFGTQSRPIVAFSIEDRAVHKIKEKRTERSKQ 484
                |..||||::.|::......|| ||||:              .:..|.: ::|...|..:.|
 Frog   309 ----GIGKGFGYVLFESADAVQLAL-KLNNS--------------ELSGRKI-RVKRSLTAEAAQ 353

  Fly   485 NNPTYQNKQQERKERRQQKRNGQETKTPVPQADNKSKLQKHIKKLEASRAAKAEGKVAEKKQLSD 549
            .:   .||..:.|                             |||:..:.||            .
 Frog   354 KS---TNKSSDFK-----------------------------KKLDTLKQAK------------P 374

  Fly   550 VQGD-FVGTAAKPGTSLKMRSKKKIVEQAKEHLKKVKTEKRKQKNK 594
            ::|: |||..|:.|         |:..:..::.||.....:|:|||
 Frog   375 LKGNSFVGETAEVG---------KVKNKGHKNKKKKTVGNKKKKNK 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM2_RBM28_like	49..124	CDD:409848
		RRM3_Nop4p	229..312	CDD:410077	21/104 (20%)
		RRM4_RBM28_like	379..468	CDD:409850	24/96 (25%)
		PTZ00121	<473..>622	CDD:173412	24/123 (20%)
rbm34	NP_001004890.1	RRM1_RBM34	168..259	CDD:409828	21/102 (21%)
		RRM2_RBM34	272..344	CDD:409829	26/158 (16%)