Protein Alignment CG4806 and bru3

DIOPT Version :10

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_001369050.1
• Gene: bru3 / 39527
• FlyBaseID: FBgn0264001
• Length: 552
• Species: Drosophila melanogaster
• Alignment Length: 569
• Identity: 102/569 - (17%)
• Similarity: 171/569 - (30%)
• Gaps: 222/569 - (39%)

  Fly    15 ESQSQPETGVRKRRNPFNTQRLK--EEKERRQKKRARLIVRNISYKSTEDSLREHFGQWGTLEDV 77
            |...||:....::.......:||  |.:.|.:....:|.|..:|.:.|||.:|:.|..:||:|:.
  Fly     6 ELVGQPKVEFAQQVTMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEEC 70

  Fly    78 HILKRGDGKLVGCAFVQYETINQATKAILNSNGKELLGRKVFVDWALGKDEYVSKNPKDEEPDEK 142
            .||:..||...|||||::.:..:|..||.|.:|.:.:
  Fly    71 TILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTM---------------------------- 107

  Fly   143 KPKVEVKEENGDEKEVKEESDAEVGKEDESSGEDSDAESGEDEEDSGESEDEENDEDHKENKDEL 207
                    .......|.:.:|.|                                   ||
  Fly   108 --------PGASSSLVVKYADTE-----------------------------------KE----- 124

  Fly   208 KSKLDIKNVKREKQISNDVQ-EGCTVFIKNVPFDAEDADLRKACRKFGLVSYAIINRQAVSGHSK 271
                  :.::|.:|::..:. ....||.:..|:.|                ||...:||....:.
  Fly   125 ------RQIRRMQQMAGHMNLLNPFVFNQFSPYGA----------------YAQQQQQAALMAAA 167

  Fly   272 GTAFVKFKAKESADLCLQAGTEFKLMDEVLD-----PH--------PALSREEMKSKQSQENKKD 323
            .||               .|:....|:.:..     ||        |:|....|.:.....|
  Fly   168 ATA---------------PGSAAAYMNPMAALATQIPHGLNGTGQPPSLPSPTMPNFNMGAN--- 214

  Fly   324 DAKDSRNLYLAREGLIMAGAKAADGVSASDMAKR----HELE-QVKTQVLKNLNRFVSRN----- 378
                :.|..........|.|.|||||..:.:.:.    |.|. .:..|.|.|.:....::
  Fly   215 ----TPNGQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTIPPQGLPNGDAATLQHAFPGL 275

  Fly   379 ------------------------------------------------RLSIHNLPQNYDNEKLK 395
                                                            .|.|::|||.:.:.:|.
  Fly   276 PPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELM 340

  Fly   396 QMALTYTGFRPHECRVMREHKVTPEHPQGKSKGFGFLSFDTHQRALAALRKLNNNPNIFGTQSRP 460
            ||.|.:..        :...||..:....:||.|||:|||....|.||::.:|
  Fly   341 QMFLPFGN--------VISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMN------------ 385

  Fly   461 IVAFSIEDRAVHKIKEKRTERSKQNNPTYQNKQQERKERRQQKRNGQET 509
              .|.|      .:|..:.:..:..:.:....|.|..:|..|:..|..|
  Fly   386 --GFQI------GMKRLKVQLKRPKDASRPYXQSEFLKRNSQQPTGATT 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM2_RBM28_like	49..124	CDD:409848	25/74 (34%)
		RRM3_Nop4p	229..312	CDD:410077	16/95 (17%)
		RRM4_RBM28_like	379..468	CDD:409850	25/88 (28%)
		PTZ00121	<473..>622	CDD:173412	7/37 (19%)
bru3	NP_001369050.1	RRM2_CELF3_4_5_6	40..120	CDD:410043	26/115 (23%)
		ELAV_HUD_SF	43..404	CDD:273741	89/508 (18%)
		RRM3_CELF3_4_5_6	319..397	CDD:241083	26/105 (25%)