Sequence 1: | NP_611955.2 | Gene: | CG4806 / 37948 | FlyBaseID: | FBgn0260456 | Length: | 657 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
Alignment Length: | 252 | Identity: | 48/252 - (19%) |
---|---|---|---|
Similarity: | 86/252 - (34%) | Gaps: | 89/252 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 222 ISNDVQEG------CTVFIKNVPFDAEDADLRKACRKFGLV--SYAIINRQAVSGHSKGTAFVKF 278
Fly 279 KAKESADLCLQAGTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGA 343
Fly 344 KAADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGFRPHE 408
Fly 409 CRVMREHKVTPEHPQGKSKGFGFLSFDTHQRALAALRKLNNNPNIFGTQSRPIVAFS 465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4806 | NP_611955.2 | RRM | <2..>154 | CDD:223796 | |
RRM_SF | 49..124 | CDD:302621 | |||
RRM3_RBM28_like | 230..306 | CDD:240861 | 16/77 (21%) | ||
RRM4_RBM28_like | 379..468 | CDD:240862 | 20/87 (23%) | ||
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 18/90 (20%) |
RRM2_MSSP | 322..400 | CDD:240690 | 24/137 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24012 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |