Protein Alignment CG4806 and CG4612

DIOPT Version :9

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 75/343 - (21%)
• Similarity: 123/343 - (35%)
• Gaps: 141/343 - (41%)

  Fly   166 VGKEDESSGEDSDAESGEDEEDSGESEDEENDEDHKENKDELKSKLDIKNVKREKQISND-VQEG 229
            ||....:|| .:....|....|||                    |:.|||:  |:.|.|. |.:.
  Fly    91 VGGGALASG-STGGSGGNSSPDSG--------------------KIYIKNL--ERSIDNKAVYDT 132

  Fly   230 CTVF--IKNVPFDAEDADLRKACRKFGLVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQAGT 292
            .:||  |.|... |:|.|                      |:|:|..||.|.::|:|...::
  Fly   133 FSVFGNILNCNV-AKDED----------------------GNSRGYGFVHFDSEEAARAAIE--- 171

  Fly   293 EFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAKAADGVSASDMAKR 357
              |:                                       .|::....|    |.......|
  Fly   172 --KV---------------------------------------NGMLCNNQK----VHVVKFIPR 191

  Fly   358 HELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGFRPHECRVMREHKVTPEHP 422
            .:.||.|....||         |.:.||.:.:..:.|::|      |.|:. |: ..||:..:.
  Fly   192 RDREQEKATHFKN---------LYVKNLSEEFTEQHLREM------FEPYG-RI-TSHKLMLDE- 238

  Fly   423 QGKSKGFGFLSFDTHQRALAAL-----RKLNNNPNIFGTQSRPIVAFSIEDRAVHKIKEKRTERS 482
            :|:|:.|||::::..|.||||:     ::|.:|..::       ||     ||:.|     .||.
  Fly   239 EGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLY-------VA-----RALSK-----AERQ 286

  Fly   483 KQNNPTYQNKQQERKERR 500
            ::.|    .|.:|||.::
  Fly   287 QEIN----RKLEERKRQK 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM	<2..>154	CDD:223796
		RRM_SF	49..124	CDD:302621
		RRM3_RBM28_like	230..306	CDD:240861	16/77 (21%)
		RRM4_RBM28_like	379..468	CDD:240862	24/93 (26%)
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	26/142 (18%)
		RRM3_I_PABPs	202..282	CDD:240826	28/109 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24012
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100