Protein Alignment CG4806 and Snrnp70

DIOPT Version :10

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_001386570.1
• Gene: Snrnp70 / 361574
• RGDID: 1307120
• Length: 451
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 57/260 - (21%)
• Similarity: 98/260 - (37%)
• Gaps: 76/260 - (29%)

  Fly    16 SQSQPETGVRKRRNPFNTQRLKEEKERRQKK--------------RAR------LIVRNISYKST 60
            ::::.|...||||         |:.||||::              .|:      |.|..::|.:|
  Rat    60 AETREERMERKRR---------EKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTT 115

  Fly    61 EDSLREHFGQWGTLEDVH-ILKRGDGKLVGCAFVQYETINQATKAILNSNGKELLGRKVFVDWAL 124
            |..||..|..:|.::.:| :..:..||..|.||::||.......|..:::||::.||:|.||...
  Rat   116 ESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180

  Fly   125 GK-------------------------------------DEYVSKNP---KDEEPDEKKPKVEVK 149
            |:                                     ||....:|   :|.:.|.::.:.|..
  Rat   181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERERRERS 245

  Fly   150 EENGDEKEVKEESDAEVGKEDESSGEDSDAESGEDEEDSG------ESEDEENDEDHKENKDELK 208
            .|...|:|.:.....:..:...|..:|....|.|..:|..      .|...|.....:|.|:||:
  Rat   246 RERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRERARRERERKEELR 310

  Fly   209  208
              Rat   311  310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM2_RBM28_like	49..124	CDD:409848	25/81 (31%)
		RRM3_Nop4p	229..312	CDD:410077
		RRM4_RBM28_like	379..468	CDD:409850
		PTZ00121	<473..>622	CDD:173412
Snrnp70	NP_001386570.1	U1snRNP70_N	3..94	CDD:432406	10/42 (24%)
		RRM_snRNP70	102..187	CDD:409682	26/84 (31%)