Sequence 1: | NP_611955.2 | Gene: | CG4806 / 37948 | FlyBaseID: | FBgn0260456 | Length: | 657 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_511058.1 | Gene: | Spx / 31558 | FlyBaseID: | FBgn0015818 | Length: | 347 | Species: | Drosophila melanogaster |
Alignment Length: | 250 | Identity: | 53/250 - (21%) |
---|---|---|---|
Similarity: | 94/250 - (37%) | Gaps: | 93/250 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 260 IIN----RQAVSGHSKGTAFVKFKAKESADLCLQAGTEFKLMDEVLDPHPALSREEMKSKQSQEN 320
Fly 321 KKDDAKDSRNLYLAREGLIMAGAKAADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNL 385
Fly 386 PQNYDNEKLKQMALTYTGFRPHECRVMREHKVTPEHPQGKSKGFGFLSFDTHQRALAALRKLNNN 450
Fly 451 PNIFGTQSRPI-VAFSIEDRAVHKIKEKRTER---------SKQNNPTYQNKQQE 495 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4806 | NP_611955.2 | RRM | <2..>154 | CDD:223796 | |
RRM_SF | 49..124 | CDD:302621 | |||
RRM3_RBM28_like | 230..306 | CDD:240861 | 11/49 (22%) | ||
RRM4_RBM28_like | 379..468 | CDD:240862 | 26/89 (29%) | ||
Spx | NP_511058.1 | RRM1_SF3B4 | 15..88 | CDD:240780 | 12/64 (19%) |
RRM2_SF3B4 | 99..181 | CDD:240781 | 27/100 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24012 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |