DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4806 and ssx

DIOPT Version :9

Sequence 1:	NP_611955.2	Gene:	CG4806 / 37948	FlyBaseID:	FBgn0260456	Length:	657	Species:	Drosophila melanogaster
Sequence 2:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster

Alignment Length:	335	Identity:	65/335 - (19%)
Similarity:	122/335 - (36%)	Gaps:	93/335 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   132 KNPKDEEPDEKKPKVEVKEENGDEKEVKEESDAEVGKEDESSGEDSDAESGEDEEDSGESEDEEN 196
            |....|..||:...:|...:|....:..::.|...|...:.:|:..:  .|:.:|.||: |::.:
  Fly     6 KMQDQEHDDEQSSDIEGSGDNVGRDDGTDDDDDSNGNMQQENGDGGN--GGDGQEHSGD-EEQHH 67

  Fly   197 DEDHKENKDELKSKLDIKNVKREKQISNDVQEGCTVFIKNVPFDAEDADLRKACRKFGLVSYAII 261
            .:|::.|.:....:..::.|.|        .....:.|..:|.|..|.:|.......|.::...|
  Fly    68 SQDNEGNDNSAGQQQQMQQVDR--------TSATNLIINYLPQDMTDRELYNLFSGCGPINTCKI 124

  Fly   262 NRQAVSGHSKGTAFVKFKAKESADLCLQAGTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAK 326
            .|...:|:|.|..||.:|.                                      |:..:||.
  Fly   125 MRDFKTGYSFGYGFVDYKT--------------------------------------ESDSEDAI 151

  Fly   327 DSRNLYLAREGLIMAGAKAADGVSASDMAKRHELEQVKT--QVLKNLNRFVSRNRLSIHNLPQNY 389
            ...|.:..|.                   ||.::...:.  |.:|:.|.:|.       ||.:|.
  Fly   152 QKLNGFYVRN-------------------KRLKVSYARPGGQSIKDTNLYVI-------NLSRNI 190

  Fly   390 DNEKLKQMALTYTGFRPHECRVMR---EHKVTPEHPQGKSKGFGFLSFDTHQRALAALRKLNNNP 451
            :::.|.::      |.|:...|.|   ..|:|     |:.:|..|:.::..:.|..|::.|||..
  Fly   191 NDDMLDRI------FSPYGLIVQRNILRDKLT-----GRPRGVAFVRYNKREEAQEAIKALNNTV 244

  Fly   452 NIFGTQSRPI 461
            ...|:|  ||
  Fly   245 PEGGSQ--PI 252

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM	<2..>154	CDD:223796	6/21 (29%)
		RRM_SF	49..124	CDD:302621
		RRM3_RBM28_like	230..306	CDD:240861	14/75 (19%)
		RRM4_RBM28_like	379..468	CDD:240862	22/86 (26%)
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	21/136 (15%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	24/94 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24012
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100