Protein Alignment CG4806 and Snrnp70

DIOPT Version :10

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_033250.3
• Gene: Snrnp70 / 20637
• MGIID: 98341
• Length: 448
• Species: Mus musculus
• Alignment Length: 260
• Identity: 57/260 - (21%)
• Similarity: 98/260 - (37%)
• Gaps: 76/260 - (29%)

  Fly    16 SQSQPETGVRKRRNPFNTQRLKEEKERRQKK--------------RAR------LIVRNISYKST 60
            ::::.|...||||         |:.||||::              .|:      |.|..::|.:|
Mouse    60 AETREERMERKRR---------EKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTT 115

  Fly    61 EDSLREHFGQWGTLEDVH-ILKRGDGKLVGCAFVQYETINQATKAILNSNGKELLGRKVFVDWAL 124
            |..||..|..:|.::.:| :..:..||..|.||::||.......|..:::||::.||:|.||...
Mouse   116 ESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180

  Fly   125 GK-------------------------------------DEYVSKNP---KDEEPDEKKPKVEVK 149
            |:                                     ||....:|   :|.:.|.::.:.|..
Mouse   181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERERRERS 245

  Fly   150 EENGDEKEVKEESDAEVGKEDESSGEDSDAESGEDEEDSG------ESEDEENDEDHKENKDELK 208
            .|...|:|.:.....:..:...|..:|....|.|..:|..      .|...|.....:|.|:||:
Mouse   246 RERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRERARRERERKEELR 310

  Fly   209  208
            Mouse   311  310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM2_RBM28_like	49..124	CDD:409848	25/81 (31%)
		RRM3_Nop4p	229..312	CDD:410077
		RRM4_RBM28_like	379..468	CDD:409850
		PTZ00121	<473..>622	CDD:173412
Snrnp70	NP_033250.3	U1snRNP70_N	3..94	CDD:432406	10/42 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..79		8/27 (30%)
		Required for interaction with U1 RNA. /evidence=ECO:0000250|UniProtKB:P08621	92..202		27/109 (25%)
		RRM_snRNP70	102..187	CDD:409682	26/84 (31%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	187..439		20/124 (16%)