Sequence 1: | NP_611955.2 | Gene: | CG4806 / 37948 | FlyBaseID: | FBgn0260456 | Length: | 657 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497077.2 | Gene: | rbm-28 / 175145 | WormBaseID: | WBGene00011043 | Length: | 608 | Species: | Caenorhabditis elegans |
Alignment Length: | 586 | Identity: | 192/586 - (32%) |
---|---|---|---|
Similarity: | 291/586 - (49%) | Gaps: | 97/586 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 KSLKDDAAESQSQPETGVRKRRNPFNTQRLKEEKERRQKKRARLIVRNISYKSTEDSLREHFGQW 71
Fly 72 GTLEDVHIL--KRGDGK-LVGCAFVQYETINQATKAILNSNGKELLGRKVFVDWALGKDEY---- 129
Fly 130 ---------VSKNPKDEEPDEKKPKVEVKEENGDEKEVKEESDAEVGKEDESSGEDSDAESGEDE 185
Fly 186 EDSGESEDEENDEDHKENKDELKSKLDIKNVKREKQISNDVQEGCTVFIKNVPFDAEDADLRKAC 250
Fly 251 RKFGLVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQAGTEFKLMD-EVLDPHPALSREEMKS 314
Fly 315 KQSQENKKDDAKDSRNLYLAREGLIMAGAKAADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNR 379
Fly 380 LSIHNLPQNYDNEKLKQMALTYT--GFRPHECRV-MREHKVTPEHPQGKSKGFGFLSFDTHQRAL 441
Fly 442 AALRKLNNNPNIFGTQSRPIVAFSIEDRAVHKIKEKRTERSKQNNPTYQNKQQER----KERRQQ 502
Fly 503 KRNGQETKTP----VPQADNK--------SKLQKHIKKLEASRAAK--------AEGKVAEKKQL 547
Fly 548 S 548 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4806 | NP_611955.2 | RRM | <2..>154 | CDD:223796 | 48/162 (30%) |
RRM_SF | 49..124 | CDD:302621 | 24/77 (31%) | ||
RRM3_RBM28_like | 230..306 | CDD:240861 | 24/76 (32%) | ||
RRM4_RBM28_like | 379..468 | CDD:240862 | 44/91 (48%) | ||
rbm-28 | NP_497077.2 | RRM | 36..>172 | CDD:223796 | 33/118 (28%) |
RRM2_RBM28_like | 96..173 | CDD:240860 | 24/77 (31%) | ||
RRM3_RBM28_like | 263..340 | CDD:240861 | 24/76 (32%) | ||
RRM4_RBM28_like | 411..503 | CDD:240862 | 44/92 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 59 | 1.000 | Domainoid score | I7080 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0127 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 237 | 1.000 | Inparanoid score | I2132 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG55464 | |
OrthoDB | 1 | 1.010 | - | - | D1181291at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003903 | |
OrthoInspector | 1 | 1.000 | - | - | oto18424 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102701 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1976 |
SonicParanoid | 1 | 1.000 | - | - | X2687 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.910 |