DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4806 and LOC1280775

DIOPT Version :10

Sequence 1:NP_611955.2 Gene:CG4806 / 37948 FlyBaseID:FBgn0260456 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_320641.5 Gene:LOC1280775 / 1280775 VectorBaseID:AGAMI1_011475 Length:642 Species:Anopheles gambiae


Alignment Length:665 Identity:284/665 - (42%)
Similarity:406/665 - (61%) Gaps:72/665 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FNTQRLKEEKERRQKKRARLIVRNISYKSTEDSLREHFGQWGTLEDVHILKRGDGKLVGCAFVQY 95
            |:...|:........::.|:||||:|||.||..||:.|.|:|.||:|:||||.|||:|||||:|:
Mosquito    12 FSINELRRRSRSYFHRQCRIIVRNLSYKITEKKLRKEFEQFGKLEEVNILKREDGKMVGCAFLQF 76

  Fly    96 ETINQATKAILNSNGKELLGRKVFVDWALGKDEYVS-KNPKDEEPD----EKKPKVEVKEENGDE 155
            ....::.|||...:|...:|||:.|.:|..|.:|.. |..|.:|.|    |....||:|:|:.|:
Mosquito    77 SQREESDKAIDEMDGHVYMGRKIGVQYAKDKSDYSRVKQEKIKEEDAIKLEDDEDVEIKQEDEDD 141

  Fly   156 KEVKEESDAEVGKE----DESSGEDSDAESGEDEE--DSGESEDEENDEDHKENKDELKSKLDIK 214
               .||.|||..:|    |:...||.|.:.|:|:|  |..|..|:|.||| :|::|:..|||...
Mosquito   142 ---DEEDDAEDDEEDDEMDDEDDEDDDEDDGDDDEFDDDEEDFDDEEDED-EEDEDKKPSKLLKA 202

  Fly   215 NVKREKQISNDVQEGCTVFIKNVPFDAEDADLRKACRKFGLVSYAIINRQAVSGHSKGTAFVKFK 279
            .:|:|.:  |:|:||..||:||:|:|.|..:|::...:||:|...:|||:.:||||||||||.||
Mosquito   203 KIKQENR--NEVEEGREVFVKNLPYDVEANELKEIMSQFGIVEKVLINRERISGHSKGTAFVIFK 265

  Fly   280 AKESADLCLQAGTEFKLMDEVLDPHPALSREEM--KSKQSQENKKDDAKDSRNLYLAREGLIMAG 342
            .|:||.|..:...:.|:.|:..:..|||.::::  :.|..||.:   |||||||||.:|||||||
Mosquito   266 LKDSAQLSCRQSLKLKVHDQYAEIMPALRKKDILDREKAKQEKR---AKDSRNLYLLKEGLIMAG 327

  Fly   343 AKAADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGFRPH 407
            :.||.|||.|||::|..|||...::|||.||||:|:||:|||:||:|.||.|::|.:.:|.:||.
Mosquito   328 SPAAKGVSQSDMSQRLRLEQRSNEILKNFNRFVARDRLTIHNIPQSYTNEDLRKMIINFTSYRPR 392

  Fly   408 ECRVMREHKVTPEHPQGKSKGFGFLSFDTHQRALAALRKLNNNPNIFGTQSRPIVAFSIEDRAVH 472
            ||||||:::.:.....|:|:|:||:||..|:.||..||||||||::||..|||||:||||||.|:
Mosquito   393 ECRVMRDNRPSFGSAAGRSRGYGFVSFPKHEIALDVLRKLNNNPSVFGKNSRPIVSFSIEDRNVY 457

  Fly   473 KIKEKRTERSKQNNPTYQNK---QQERKERRQQKRNGQETKTPVPQADNKSKLQK-------HIK 527
            .|::||.|:|:.||||||.|   .||:|.:|.|.|  :|||        :..|:|       .::
Mosquito   458 NIRQKRLEKSRANNPTYQKKIQELQEKKAKRSQSR--KETK--------RQTLEKLAVAPTALLQ 512

  Fly   528 KLEASRAAKAEGKVAEKKQ----LSDVQGDFVGTAAKPGTSLKMRSKKKIVEQAKEHLKKVKTEK 588
            ||..:  ||....|.:|||    |..:...|.|..:|.|.: .:||.:||..||..||:::|.|:
Mosquito   513 KLNPN--AKPVALVPKKKQRKRDLEQMVTPFSGELSKEGKA-GLRSNRKITYQADAHLQRIKEER 574

  Fly   589 RKQKNKKIRESHLAER-----KANNRPKQGR-----KKETDDLRPLINKYKNMISGNQGGGGVTG 643
            :  :.||:|....|.|     :.|.|.||..     |||.......|.|||||||          
Mosquito   575 K--EGKKLRRKQEAARNRIAKQGNKRVKQKMNVNELKKEDAFFNEAIGKYKNMIS---------- 627

  Fly   644 GKIKKP-KRTKWYTE 657
            ...|:| ::.|||:|
Mosquito   628 QATKQPVRKKKWYSE 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4806NP_611955.2 RRM2_RBM28_like 49..124 CDD:409848 39/74 (53%)
RRM3_Nop4p 229..312 CDD:410077 36/82 (44%)
RRM4_RBM28_like 379..468 CDD:409850 49/88 (56%)
PTZ00121 <473..>622 CDD:173412 58/172 (34%)
LOC1280775XP_320641.5 None

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