DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4806 and LOC100490872

DIOPT Version :9

Sequence 1:	NP_611955.2	Gene:	CG4806 / 37948	FlyBaseID:	FBgn0260456	Length:	657	Species:	Drosophila melanogaster
Sequence 2:	XP_002932728.2	Gene:	LOC100490872 / 100490872	-ID:	-	Length:	449	Species:	Xenopus tropicalis

Alignment Length:	175	Identity:	42/175 - (24%)
Similarity:	71/175 - (40%)	Gaps:	47/175 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 KSLKDDAAESQSQPETGVRKRRNPFNTQ--------------------RLKEEKERRQKKR---- 47
            |.:.:|..:   |.|.|:.    |||.|                    ::||:::....|:
Frog    71 KIINNDCGQ---QTEFGLL----PFNKQKDAIRAVDKMKGMDIYLAQAKIKEKRQTEFSKKPEPL 128

  Fly    48 -------ARLIVRNISYKSTEDSLREHFGQWGTLEDVHILKRGDGKLVGCAFVQYETINQATKAI 105
                   ..|.|:|:||:..:..|.:.|..:|.:....:::.| |:..|..||.:.|..:|.||:
Frog   129 HKPRYNSVNLYVKNLSYEIDDYRLNKEFAPFGIITSAKVMREG-GRSKGFGFVCFSTPAEARKAL 192

  Fly   106 LNSNGKELLGRKVFVDWALGKDE--------YVSKNPKDEEPDEK 142
            ...|||.|..:.::|.||..|.|        |..:..|...|:.|
Frog   193 SGMNGKILASKPLYVAWAQRKQERQVSLAQQYTQRMEKAWIPNTK 237

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM	<2..>154	CDD:223796	42/175 (24%)
		RRM_SF	49..124	CDD:302621	23/74 (31%)
		RRM3_RBM28_like	230..306	CDD:240861
		RRM4_RBM28_like	379..468	CDD:240862
LOC100490872	XP_002932728.2	PABP-1234	<7..431	CDD:130689	42/175 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1181291at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010