DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pof and WHI4

DIOPT Version :10

Sequence 1:NP_523851.1 Gene:Pof / 37947 FlyBaseID:FBgn0035047 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_010057.1 Gene:WHI4 / 851302 SGDID:S000002383 Length:649 Species:Saccharomyces cerevisiae


Alignment Length:406 Identity:76/406 - (18%)
Similarity:128/406 - (31%) Gaps:107/406 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DTAKLSRRELAKMRREHTLRALALERELTNKPGQTPASEVLLVRFPDPEITAPMLAGLS------ 152
            :|..||:.....|...::..|:....| ||...:.|..      |....|...||..|:      
Yeast    26 ETVPLSKEATYPMPTAYSFSAVRSNSE-TNIKRENPQG------FAKEPIMTSMLHNLTMSTGKG 83

  Fly   153 --KDIRDVVLP--ISVAPRYCLVHLKAGADVEATICDINRVRFGTGHLRAELK-----PFSDEEQ 208
              .|:..:. |  :.|.| |||:......|:....| .......||....|||     ||:|.|:
Yeast    84 NGNDVNSLA-PHDVDVGP-YCLLLRNLPKDITLREC-YCIFSLATGVSSIELKRDDREPFNDNEK 145

  Fly   209 AEFIDPCSLYVGNIPFNMTTSAIKAYFANAM-------------RVDIGVLKREKRARYAFVRYA 260
            ...:...||            ::..::||.:             |..|.|:..:.:...:|..:.
Yeast   146 VVVVKFGSL------------SLVTHYANILNSKSEIFGPSFPFRSHIDVVNEQTQLPVSFQEHV 198

  Fly   261 SPDQTMEAFKELVDSPLNSRTLTVRYRRLRKRAGMPMVQCATSFQALQSPNGDDDNTDCKVISPP 325
            |...|.       .||.|.:..:.....::.::...:....||    .||.|..        :..
Yeast   199 SSGTTN-------SSPKNYQLSSSAQNEIQNQSFNTISYGKTS----SSPLGPS--------AAK 244

  Fly   326 PLESIIISDSDNCSDSSGNGKEDGKRKKKINEQEREIEKLKRQMAEYGAIIKSLQFRQNSLEDTF 390
            |..|::...|...|.:...|.|...::|                       :|:.|.:||:....
Yeast   245 PRPSLLSERSLRFSFNDPFGLETISQRK-----------------------ESVPFLRNSISQHD 286

  Fly   391 IPDLTPKVEPSVNPTGCLLGSNAVHLMRDIKKECDYLGIPDPVPATKPTTQAQDDSQKKAKRSCF 455
            :.::|....|:..|.....|.:.:.|.:|...|..:.|               |:.......|.|
Yeast   287 LSNVTTTPVPAGMPPQKDAGKSLLLLEKDEINESIWNG---------------DELVNDVGNSSF 336

  Fly   456 GRLFTGPFRRGTSAMK 471
            |.....|....|..|:
Yeast   337 GASLQEPPMSSTPVME 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PofNP_523851.1 RRM_SF 217..285 CDD:409669 12/80 (15%)
WHI4NP_010057.1 RRM_scw1_like 531..624 CDD:409691
Blue background indicates that the domain is not in the aligned region.

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