DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pof and Celf4

DIOPT Version :10

Sequence 1:NP_523851.1 Gene:Pof / 37947 FlyBaseID:FBgn0035047 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001349204.1 Gene:Celf4 / 108013 MGIID:1932407 Length:554 Species:Mus musculus


Alignment Length:100 Identity:19/100 - (19%)
Similarity:33/100 - (33%) Gaps:40/100 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 VHISLHPVDVKRRCSLSRNSSCS------------------SADRKDIVTCE-----DLKMAMDY 257
            |:..|....:.|.||.|..::||                  |:....|:..:     .|.:.::|
Mouse    94 VYARLSSPSITRECSSSSQNNCSVVCSVVNVSAVSLSWYKGSSVLSSIIVSDLSISLSLPLEVEY 158

  Fly   258 --------------SNEE---DVSDETEPNSDNDL 275
                          ||:.   |::...:|..|.||
Mouse   159 QDRNTYSCVINNTISNQTTHLDINTLCQPCPDEDL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PofNP_523851.1 RRM_SF 217..285 CDD:409669 17/98 (17%)
Celf4NP_001349204.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..39
RRM1_CELF3_4_5_6 49..135 CDD:410041 8/40 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..149 2/27 (7%)
RRM2_CELF3_4_5_6 150..230 CDD:410043 8/43 (19%)
Necessary for TNNT2 exon 5 inclusion. /evidence=ECO:0000250 238..257
RRM_SF 415..>463 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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