DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pof and CELF1

DIOPT Version :10

Sequence 1:NP_523851.1 Gene:Pof / 37947 FlyBaseID:FBgn0035047 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001317201.1 Gene:CELF1 / 10658 HGNCID:2549 Length:514 Species:Homo sapiens


Alignment Length:324 Identity:62/324 - (19%)
Similarity:114/324 - (35%) Gaps:116/324 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 PD-PEITA-PMLAG------LSKDIRDV------VLPISV----------APRYCLVHL---KAG 176
            || |::.| .|..|      ..||:|::      |..|:|          :...|.|..   ||.
Human    35 PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAA 99

  Fly   177 ADVEATICDINRVRFGTGHLRAELKPFSDEEQAEFIDPCSLYVGNIPFNMTTSAIKAYFANAMRV 241
            .:.:..:.:: :|..|..| ..::|| :|.|:...::...|::|.|....|.:.|:..|::..::
Human   100 LEAQNALHNM-KVLPGMHH-PIQMKP-ADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQI 161

  Fly   242 DIGVLKREKRARYAFVRYASPDQTME--AFKELVDSPLNSRTLTVRYRRLRKRAGMPMVQCATSF 304
            :...:.|            .||....  ||            :|...|.:.:.|...|.| |.:.
Human   162 EECRILR------------GPDGLSRGCAF------------VTFTTRAMAQTAIKAMHQ-AQTM 201

  Fly   305 QALQSPNGDDDNTDCKVISPPPLESIIISDSDNCSDSSGNGKEDGKRKKKINEQEREIEKLKRQM 369
            :...||                   :::..:|.               :|..||:|..::|::||
Human   202 EGCSSP-------------------MVVKFADT---------------QKDKEQKRMAQQLQQQM 232

  Fly   370 AEYGA-----------------IIKSLQFRQNSLEDTFIPDLTPKVEPSVNPTGCLLGSNAVHL 416
            .:..|                 :...||..|.:.....:..|:     |::|.|   |.||:.|
Human   233 QQISAASVWGNLAGLNTLGPQYLALYLQLLQQTASSGNLNTLS-----SLHPMG---GLNAMQL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PofNP_523851.1 RRM_SF 217..285 CDD:409669 12/69 (17%)
CELF1NP_001317201.1 RRM1_CELF1_2_Bruno 42..125 CDD:410040 18/85 (21%)
RRM2_CELF1_2 134..214 CDD:410042 19/123 (15%)
RRM3_CELF1_2 422..513 CDD:241082
Blue background indicates that the domain is not in the aligned region.

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