DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4781 and lrrc4ca

DIOPT Version :9

Sequence 1:NP_611951.1 Gene:CG4781 / 37943 FlyBaseID:FBgn0035043 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001018583.1 Gene:lrrc4ca / 553785 ZFINID:ZDB-GENE-050522-533 Length:647 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4781NP_611951.1 leucine-rich repeat 90..108 CDD:275380
LRR_8 108..167 CDD:290566
leucine-rich repeat 109..132 CDD:275380
LRR_RI <121..>261 CDD:238064
leucine-rich repeat 133..156 CDD:275380
leucine-rich repeat 157..180 CDD:275380
leucine-rich repeat 181..208 CDD:275380
leucine-rich repeat 230..253 CDD:275380
leucine-rich repeat 254..274 CDD:275380
leucine-rich repeat 275..299 CDD:275380
leucine-rich repeat 300..319 CDD:275380
lrrc4caNP_001018583.1 LRRNT 48..81 CDD:214470
LRR <78..288 CDD:227223
leucine-rich repeat 79..102 CDD:275380
leucine-rich repeat 103..126 CDD:275380
leucine-rich repeat 127..150 CDD:275380
leucine-rich repeat 151..174 CDD:275380
leucine-rich repeat 175..199 CDD:275380
leucine-rich repeat 200..221 CDD:275380
leucine-rich repeat 222..245 CDD:275380
leucine-rich repeat 246..269 CDD:275380
leucine-rich repeat 270..291 CDD:275380
LRRCT 302..>340 CDD:214507
IG 361..443 CDD:214652
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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