DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4781 and zgc:113307

DIOPT Version :9

Sequence 1:NP_611951.1 Gene:CG4781 / 37943 FlyBaseID:FBgn0035043 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001018560.1 Gene:zgc:113307 / 553753 ZFINID:ZDB-GENE-050522-29 Length:343 Species:Danio rerio


Alignment Length:220 Identity:72/220 - (32%)
Similarity:101/220 - (45%) Gaps:30/220 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GNRALRIDCSYKDYKVADLSLLLPLYID-----------SLDLSWNALDSVPIFTSDSLHQLNLR 115
            |:||.. :.:|..:.:.|.:.||...:|           :|.::.|.|..||......|.||.|.
Zfish    87 GSRAFD-NTTYLRWLILDHNELLSEQLDNVLFSSLTRLVNLFINHNNLTKVPAGLPSGLKQLRLA 150

  Fly   116 HNNISQLVSGNFKQLTSLRELYLGWNSIGKLESGSFDGLPHLQVLDLAHNNLHLLPGHLFAPLLV 180
            :|:|.::..|:|:.|.||..:.|..|.:..:|.|.|.||..|.:|||:||.|...|.||  |..|
Zfish   151 YNHIEKISEGDFQNLDSLTLILLQGNRLKTIEEGDFKGLGALNLLDLSHNFLDTFPKHL--PPSV 213

  Fly   181 LGTLDISWNRRFNESGGDL-------YTGLGVNWKLSTLRLDACSLNDLHLPVNAPLKELSLRRN 238
             ..|.:|.|.....|...|       |..||.| ||...|||..:.|      ...|.||.|..|
Zfish   214 -QQLYLSNNSLTGLSENSLHAFSGLRYLRLGHN-KLRNERLDPGAFN------LTSLVELDLSYN 270

  Fly   239 QLKRIPTQLPETLLRLDISDNLLEE 263
            :|..||: :|.||..|.:..|.::|
Zfish   271 RLTEIPS-VPITLQYLYLEVNHIQE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4781NP_611951.1 leucine-rich repeat 90..108 CDD:275380 5/17 (29%)
LRR_8 108..167 CDD:290566 24/58 (41%)
leucine-rich repeat 109..132 CDD:275380 9/22 (41%)
LRR_RI <121..>261 CDD:238064 52/146 (36%)
leucine-rich repeat 133..156 CDD:275380 8/22 (36%)
leucine-rich repeat 157..180 CDD:275380 11/22 (50%)
leucine-rich repeat 181..208 CDD:275380 9/33 (27%)
leucine-rich repeat 230..253 CDD:275380 11/22 (50%)
leucine-rich repeat 254..274 CDD:275380 3/10 (30%)
leucine-rich repeat 275..299 CDD:275380
leucine-rich repeat 300..319 CDD:275380
zgc:113307NP_001018560.1 LRRNT 41..70 CDD:214470
leucine-rich repeat 56..72 CDD:275380
LRR_RI <60..274 CDD:238064 64/197 (32%)
LRR_8 72..133 CDD:290566 10/46 (22%)
leucine-rich repeat 73..96 CDD:275380 3/9 (33%)
leucine-rich repeat 97..122 CDD:275380 4/24 (17%)
leucine-rich repeat 123..146 CDD:275380 6/22 (27%)
LRR_8 142..200 CDD:290566 22/57 (39%)
leucine-rich repeat 147..167 CDD:275380 7/19 (37%)
leucine-rich repeat 168..191 CDD:275380 8/22 (36%)
leucine-rich repeat 192..212 CDD:275380 11/21 (52%)
LRR_8 211..272 CDD:290566 21/68 (31%)
leucine-rich repeat 213..236 CDD:275380 6/23 (26%)
leucine-rich repeat 237..261 CDD:275380 10/30 (33%)
leucine-rich repeat 282..311 CDD:275380 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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