Protein Alignment CG4781 and alrm

DIOPT Version :10

• Sequence 1: NP_611951.1
• Gene: CG4781 / 37943
• FlyBaseID: FBgn0035043
• Length: 469
• Species: Drosophila melanogaster
• Sequence 2: NP_651393.1
• Gene: alrm / 43074
• FlyBaseID: FBgn0039332
• Length: 471
• Species: Drosophila melanogaster
• Alignment Length: 276
• Identity: 73/276 - (26%)
• Similarity: 120/276 - (43%)
• Gaps: 43/276 - (15%)

  Fly    64 RALRID-CSYKDYKVADL---SLLLPLYIDSLDLSWNALDSVP--IFT-SDSLHQLNLRHNNISQ 121
            :.||:: ||.:.::....   |.|:.|:     |.:|.|..:|  ||. :|:|..|:|:.|.:.|
  Fly    92 QVLRMENCSLETFEKPQFEGASNLMSLF-----LGYNRLKDIPKNIFLGADNLATLHLQGNQLKQ 151

  Fly   122 LVSGNFKQLTSLRELYLGWNSIGKLESGSFDGLPHLQVLDLAHNNLHLLPGHLFAPLLVLGTLDI 186
            |.:.:|..|..::||.|..|.:.::..|.|.|:..|..|:||.|.|..||..:|...|.|..|::
  Fly   152 LGNHSFHALKEVKELSLAENQLEQISLGVFSGMRKLMDLNLAGNRLDALPRGVFDRNLNLTKLNL 216

  Fly   187 SWNR--RFN-------------ESGGDLYTGLGVNWKLSTLRL-DACSLNDLHLPVNAPLKELSL 235
            :.||  .|.             :..|:::..|.:|:.:..:.: .:|.|.  .|.|...:.||.|
  Fly   217 ARNRFTAFESELLKLQPVFTQLDISGNIFQELTLNFTMLDVAIAHSCDLR--RLTVYGVIHELDL 279

  Fly   236 RRNQLKRIP-TQLPETLLRLDISDNLLEELLPEDTANLTQVRQLFIEDMPVLQRVVANSLTHVDV 299
            ..|.|:.:| ..|...:..||:|.|.|..|........|.:.:|.:            |.|....
  Fly   280 HNNSLREMPHIPLAANVSSLDLSHNPLGNLQGNPLRRFTSLLRLNL------------SATGAHE 332

  Fly   300 LETLSFQNSRQLSHLD 315
            |....|:....|..||
  Fly   333 LPEGLFKKQSHLQMLD 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4781	NP_611951.1	LRR	<90..367	CDD:443914	66/246 (27%)
		leucine-rich repeat	90..108	CDD:275380	6/20 (30%)
		leucine-rich repeat	109..132	CDD:275380	8/22 (36%)
		leucine-rich repeat	133..156	CDD:275380	7/22 (32%)
		leucine-rich repeat	157..180	CDD:275380	9/22 (41%)
		leucine-rich repeat	181..208	CDD:275380	8/41 (20%)
		leucine-rich repeat	230..253	CDD:275380	7/23 (30%)
		leucine-rich repeat	254..274	CDD:275380	6/19 (32%)
		leucine-rich repeat	275..299	CDD:275380	3/23 (13%)
		leucine-rich repeat	300..319	CDD:275380	5/16 (31%)
alrm	NP_651393.1	leucine-rich repeat	91..114	CDD:275380	4/21 (19%)
		LRR	<100..426	CDD:443914	70/268 (26%)
		leucine-rich repeat	115..138	CDD:275380	8/27 (30%)
		leucine-rich repeat	139..162	CDD:275380	8/22 (36%)
		leucine-rich repeat	163..186	CDD:275380	7/22 (32%)
		leucine-rich repeat	187..210	CDD:275380	9/22 (41%)
		leucine-rich repeat	211..283	CDD:275380	15/73 (21%)
		leucine-rich repeat	284..319	CDD:275380	9/34 (26%)
		leucine-rich repeat	320..343	CDD:275380	5/34 (15%)
		leucine-rich repeat	344..365	CDD:275380	3/5 (60%)