DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4781 and conv

DIOPT Version :9

Sequence 1:NP_611951.1 Gene:CG4781 / 37943 FlyBaseID:FBgn0035043 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster


Alignment Length:323 Identity:84/323 - (26%)
Similarity:146/323 - (45%) Gaps:74/323 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LDLSWNALDSVP------IFTSDSLHQLNLRHNNISQLVSGNFKQLTSLRELYLGWNSIGKLESG 149
            |:.|:|::..:|      ::   .||.:::.|||||.:.:|.|:.|.|||.:.|..||:.:::|.
  Fly   442 LNASYNSITEIPKNCFPKLY---ELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSS 503

  Fly   150 SFDGLPHLQVLDLAHNNLHLLPGHLFAPLLVLGTLDISWNRRFNESGGDLYTGLGVNWKLSTLRL 214
            :|..||.|..:||:||.|         ..:|.|:|.                      ||::||.
  Fly   504 TFGTLPTLLEMDLSHNEL---------VSVVRGSLA----------------------KLTSLRQ 537

  Fly   215 DACSLNDL----HLPVNAPLKELSLRRNQLKRIPT---QLPETLLRLDISDNLLEELL-PEDTAN 271
            ...:.|.|    .||::  |.||....|:|..||:   .:..:|:.||:|.|.|.:.| .|....
  Fly   538 LYLNNNQLEKLFQLPIS--LNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTG 600

  Fly   272 LTQVRQLFIEDMPVLQRVVANSLTHVDVLETLSFQNSRQLSHLDAEAFGPIMTTPTKKRALRSLS 336
            |..|::|.:::..:.| ...:::..:..|:.|..:|: .::.|:..|||       |...|..|:
  Fly   601 LLVVQRLKLQNNGISQ-PPKDAVAVMSTLQYLHLENN-NITTLERSAFG-------KLPVLFELN 656

  Fly   337 FRGTMLRTFNSTLAPIFTQLAELDLN-------------GLPLQCDCELVW--LKQLPVQTNG 384
            ..|..::..:........||..|:|:             |||...:.:|.:  |.:|..:|||
  Fly   657 LYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNG 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4781NP_611951.1 leucine-rich repeat 90..108 CDD:275380 4/22 (18%)
LRR_8 108..167 CDD:290566 25/58 (43%)
leucine-rich repeat 109..132 CDD:275380 10/22 (45%)
LRR_RI <121..>261 CDD:238064 42/146 (29%)
leucine-rich repeat 133..156 CDD:275380 8/22 (36%)
leucine-rich repeat 157..180 CDD:275380 6/22 (27%)
leucine-rich repeat 181..208 CDD:275380 2/26 (8%)
leucine-rich repeat 230..253 CDD:275380 8/25 (32%)
leucine-rich repeat 254..274 CDD:275380 8/20 (40%)
leucine-rich repeat 275..299 CDD:275380 3/23 (13%)
leucine-rich repeat 300..319 CDD:275380 4/18 (22%)
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
LRR_8 198..258 CDD:290566
leucine-rich repeat 200..223 CDD:275380
LRR_RI 201..545 CDD:238064 38/136 (28%)
leucine-rich repeat 224..271 CDD:275380
LRR_8 245..306 CDD:290566
leucine-rich repeat 272..295 CDD:275380
LRR_8 296..354 CDD:290566
leucine-rich repeat 296..319 CDD:275380
LRR_8 322..401 CDD:290566
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380
leucine-rich repeat 371..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380
leucine-rich repeat 416..438 CDD:275380
LRR_8 437..495 CDD:290566 18/55 (33%)
leucine-rich repeat 439..462 CDD:275380 4/22 (18%)
leucine-rich repeat 463..486 CDD:275380 10/22 (45%)
LRR_RI 486..738 CDD:238064 70/276 (25%)
LRR_8 486..545 CDD:290566 24/89 (27%)
leucine-rich repeat 487..510 CDD:275380 8/22 (36%)
leucine-rich repeat 511..534 CDD:275380 11/53 (21%)
leucine-rich repeat 535..554 CDD:275380 6/18 (33%)
LRR_8 554..614 CDD:290566 18/61 (30%)
leucine-rich repeat 555..578 CDD:275380 7/22 (32%)
leucine-rich repeat 579..603 CDD:275380 9/23 (39%)
leucine-rich repeat 604..627 CDD:275380 3/23 (13%)
LRR_8 626..710 CDD:290566 19/91 (21%)
leucine-rich repeat 628..649 CDD:275380 7/28 (25%)
leucine-rich repeat 652..672 CDD:275380 3/19 (16%)
LRR_8 698..765 CDD:290566 7/22 (32%)
leucine-rich repeat 700..726 CDD:275380 6/20 (30%)
leucine-rich repeat 727..745 CDD:275380
LRR_8 777..839 CDD:290566
leucine-rich repeat 779..802 CDD:275380
leucine-rich repeat 829..852 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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