DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4781 and Lrrc4c

DIOPT Version :9

Sequence 1:NP_611951.1 Gene:CG4781 / 37943 FlyBaseID:FBgn0035043 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001276671.1 Gene:Lrrc4c / 241568 MGIID:2442636 Length:640 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4781NP_611951.1 leucine-rich repeat 90..108 CDD:275380
LRR_8 108..167 CDD:290566
leucine-rich repeat 109..132 CDD:275380
LRR_RI <121..>261 CDD:238064
leucine-rich repeat 133..156 CDD:275380
leucine-rich repeat 157..180 CDD:275380
leucine-rich repeat 181..208 CDD:275380
leucine-rich repeat 230..253 CDD:275380
leucine-rich repeat 254..274 CDD:275380
leucine-rich repeat 275..299 CDD:275380
leucine-rich repeat 300..319 CDD:275380
Lrrc4cNP_001276671.1 LRRNT 47..80 CDD:214470
PPP1R42 65..235 CDD:411060
LRR 1 77..98
leucine-rich repeat 78..101 CDD:275380
LRR 2 101..122
leucine-rich repeat 102..125 CDD:275380
LRR 3 125..146
leucine-rich repeat 126..149 CDD:275380
LRR 4 149..170
leucine-rich repeat 150..173 CDD:275380
LRR 5 173..195
leucine-rich repeat 174..198 CDD:275380
LRR 6 198..219
leucine-rich repeat 199..220 CDD:275380
LRR_8 220..279 CDD:404697
LRR 7 220..241
leucine-rich repeat 221..244 CDD:275380
LRR 8 244..265
leucine-rich repeat 245..268 CDD:275380
LRR_8 267..>301 CDD:404697
LRR 9 268..289
leucine-rich repeat 269..290 CDD:275380
LRRCT 301..>339 CDD:214507
IG 360..443 CDD:214652
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 463..482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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