DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4781 and dma-1

DIOPT Version :10

Sequence 1:NP_611951.1 Gene:CG4781 / 37943 FlyBaseID:FBgn0035043 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_492253.1 Gene:dma-1 / 187968 WormBaseID:WBGene00011345 Length:603 Species:Caenorhabditis elegans


Alignment Length:554 Identity:131/554 - (23%)
Similarity:210/554 - (37%) Gaps:177/554 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PESSKNSRRSCECSNVSASPWG---NRALRIDCSYKDYKVADLSLLLPLYIDSL----------- 91
            |.|..|   .|||.. :.|.|.   .:|:..|..|     |::...|||.:.||           
 Worm    21 PSSCPN---LCECDQ-NDSSWSVYCRKAIINDTIY-----AEILNQLPLTLRSLHIQPPSNRIGS 76

  Fly    92 -DLSWNALDSVPIFTS-DSLHQLNLRHNNISQLVSGNFKQLTSLRELYLGWNSIGKLESGSFDGL 154
             .|.||  |::..|.. ..|..:|.:...:|:.:     :|.||..|.|..|:|......:|.|:
 Worm    77 NKLRWN--DNINRFAQLRVLRLINCQIPAMSRSI-----RLPSLEVLDLHSNNIEHATMSNFGGM 134

  Fly   155 PHLQVLDLAHNNLHLLPGHLFAPLLVLGTLDISWNRRFNESGGDLYTGL--GVNWKLSTLRLDA- 216
            |.|:||||:.|:|::||..:|..|..|.:|.:|     |.:..||.|.|  |:| .|..||||. 
 Worm   135 PKLRVLDLSSNHLNILPTGVFTYLRALRSLSLS-----NNTISDLSTNLLRGLN-SLRVLRLDRN 193

  Fly   217 ------------------------CSLNDLH------LPVNAPLKELSLRRNQLKRIPTQ----L 247
                                    |:|:.::      :|   .|::|.:..|.||.:||:    |
 Worm   194 PIPIEHINELFTDVSQLDELYLNHCNLSSIYSLALDRIP---QLRQLGIGGNNLKMVPTKELRSL 255

  Fly   248 PETLLRLDISDNLLEELLPEDTANLTQVRQL--------------FIED----MPVLQRVVANSL 294
            |: |..||:|.|.::|:......| |.:.:|              |.||    ||:  |.:..|.
 Worm   256 PQ-LSVLDLSHNSIQEITACAFCN-TNISKLDLSHNLLGISKDSPFNEDAFRTMPL--RHLDLSF 316

  Fly   295 THVDVLET--------------------LSFQNS-----RQLSHLDAE----AFGPIMTTPTKKR 330
            .|::..::                    .:|:.|     :.|.||:..    .|.|:. .|::..
 Worm   317 NHMNDFDSKWLGWAQEELTSIALSGNFLKNFEESWTYTLKSLIHLELAYNHIKFIPVQ-LPSRYY 380

  Fly   331 ALRSLSFRGTML------------------------RTFNSTLAPIFTQLAELDLNGLPLQCDCE 371
            .|.||:..|..|                        .||:.|.......:.::.::|.|..|.|.
 Worm   381 HLISLNISGNELTYLPDNINTLLPNVKTFDITANRFHTFSHTDLAFLNNVEQVYVDGNPWDCSCA 445

  Fly   372 LVWL----------KQLPVQTNGRCYKPARIRGMLVTSARGDAFSCDTWPRWAYGLVVLSLIALS 426
            :..|          :.:....|.||..|:.:.|..|. |..|...|.......|||...|.:.:.
 Worm   446 IQGLQVHMRDRYAMRHILNYDNVRCATPSLVEGHSVL-AITDVNDCAVLFGARYGLTQTSEMLIL 509

  Fly   427 AAGI------YLIVMGL------RPHRGVTMRRK 448
            .||:      .|:::|.      |.::|..:.|:
 Worm   510 LAGVLLFAALLLMILGCIYFLRERQYKGSYVTRE 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4781NP_611951.1 LRR <90..367 CDD:443914 93/397 (23%)
leucine-rich repeat 90..108 CDD:275380 7/30 (23%)
leucine-rich repeat 109..132 CDD:275380 4/22 (18%)
leucine-rich repeat 133..156 CDD:275380 7/22 (32%)
leucine-rich repeat 157..180 CDD:275380 11/22 (50%)
leucine-rich repeat 181..208 CDD:275380 10/28 (36%)
leucine-rich repeat 230..253 CDD:275380 10/26 (38%)
leucine-rich repeat 254..274 CDD:275380 6/19 (32%)
leucine-rich repeat 275..299 CDD:275380 9/41 (22%)
leucine-rich repeat 300..319 CDD:275380 5/47 (11%)
dma-1NP_492253.1 LRR 43..415 CDD:443914 95/397 (24%)
leucine-rich repeat 91..112 CDD:275380 4/25 (16%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
leucine-rich repeat 137..160 CDD:275380 11/22 (50%)
leucine-rich repeat 161..184 CDD:275380 10/28 (36%)
leucine-rich repeat 185..209 CDD:275380 5/23 (22%)
leucine-rich repeat 210..233 CDD:275380 3/25 (12%)
leucine-rich repeat 234..257 CDD:275380 8/22 (36%)
leucine-rich repeat 258..280 CDD:275380 7/22 (32%)
leucine-rich repeat 281..307 CDD:275380 4/25 (16%)
leucine-rich repeat 309..357 CDD:275380 5/49 (10%)
leucine-rich repeat 382..405 CDD:275380 5/22 (23%)
leucine-rich repeat 406..429 CDD:275380 3/22 (14%)
LRRCT 438..>478 CDD:214507 8/39 (21%)

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