DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and PRB1

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_179064.1 Gene:PRB1 / 815945 AraportID:AT2G14580 Length:161 Species:Arabidopsis thaliana


Alignment Length:159 Identity:35/159 - (22%)
Similarity:62/159 - (38%) Gaps:29/159 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ARLIPLSNQ-LQAFIVHQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSGD 118
            |.::||..| .|...|:..|..|:|:..|            .::||..||..|...|.:  |.||
plant    19 ALVVPLKAQDSQQDYVNAHNQARSQIGVG------------PMQWDEGLAAYARNYANQ--LKGD 69

  Fly   119 GCRNTRRFKHVGQLTGHVIFSAGKHSDLELLRHKISNWFGQYMRASKDLQAADPSSNISSFRQLI 183
             ||........|:   ::..|.|..|.:.    .::.|..:  :|:.:......:.....:.|::
plant    70 -CRLVHSRGPYGE---NLAKSGGDLSGVA----AVNLWVNE--KANYNYDTNTCNGVCGHYTQVV 124

  Fly   184 QESSTHMGCGVLRQRSHMLWHQQFIVCNF 212
            ..:|..:||..:|..:    ....|.||:
plant   125 WRNSVRLGCAKVRCNN----GGTIISCNY 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 31/148 (21%)
PRB1NP_179064.1 CAP_PR-1 30..161 CDD:349400 31/148 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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