DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and Glipr1

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_006514280.1 Gene:Glipr1 / 73690 MGIID:1920940 Length:270 Species:Mus musculus


Alignment Length:171 Identity:46/171 - (26%)
Similarity:66/171 - (38%) Gaps:53/171 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VHQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSGDGCRNTRRFKHVGQLT 133
            ||  |..|::|:.       |||.|..:.|||:|||:|:...|.|           .|||..||.
Mouse    40 VH--NQLRSKVSP-------PARNMLYMSWDPKLAQIAKAWTKSC-----------EFKHNPQLH 84

  Fly   134 GHVIFSAGKHSDLELLRHKISNWFGQYMRASKDLQAADPSSNISSFRQLIQ--ESSTHMGCGVLR 196
            ..:      |.:...|...|  |.|       .|.....||.||::.:.|:  :.||       |
Mouse    85 SRI------HPNFTALGENI--WLG-------SLSIFSVSSAISAWYEEIKHYDFST-------R 127

  Fly   197 QRSHMLWHQQFIVCNFARRNMPREQVYQVGVAATGCRSGRN 237
            :..|:..|...:|.         ...|::|.|...|.:|.|
Mouse   128 KCRHVCGHYTQVVW---------ADSYKLGCAVQLCPNGAN 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 40/145 (28%)
Glipr1XP_006514280.1 CAP_GLIPR1-like 32..168 CDD:349404 46/171 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841320
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I5254
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.900

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