DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3640 and glipr2l

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001005978.1 Gene:glipr2l / 449805 ZFINID:ZDB-GENE-041010-53 Length:154 Species:Danio rerio


Alignment Length:102 Identity:19/102 - (18%)
Similarity:36/102 - (35%) Gaps:31/102 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 NTRRFKHVG---QLTGHVIFSAGKHSD----LELLRHKISN----------WFGQYMRASKDL-- 167
            |..|.||..   :|:..:...|.::::    ..:|:|.:.:          | ..|.:..||:  
Zfish    18 NEYRRKHQAPPLKLSSKLCSEASRYAESLASTRILKHSVESSRGNCGENLAW-ASYDQTGKDVTD 81

  Fly   168 ---------QAADP--SSNISSFRQLIQESSTHMGCG 193
                     ....|  ||....|..::.:.|..:|.|
Zfish    82 RWYNEVNQYNFNQPGFSSGTGHFTAVVWKGSKKLGVG 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 19/102 (19%)
glipr2lNP_001005978.1 SCP_GAPR-1_like 9..139 CDD:240182 19/102 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.