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Protein Alignment CG3640 and R3hdml
DIOPT Version :9
Sequence 1: | NP_611950.1 |
Gene: | CG3640 / 37942 |
FlyBaseID: | FBgn0035042 |
Length: | 296 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102432.1 |
Gene: | R3hdml / 366245 |
RGDID: | 1305296 |
Length: | 253 |
Species: | Rattus norvegicus |
Alignment Length: | 185 |
Identity: | 51/185 - (27%) |
Similarity: | 82/185 - (44%) |
Gaps: | 32/185 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 YRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSGDGCRNTRRFKHVGQ-LTGHVIF 138
|.|.:.: |...||..|..:.||.:||:.||..|.:|..:....:.| |:||| |:.|
Rat 69 YHNHIRA---SVHPPASNMEYMVWDEQLARAAEAWATQCIWAHGPSQLT---KYVGQNLSVH--- 124
Fly 139 SAGKHSDLELLRHKISNWFGQYMR----ASKDLQAADP---SSNI-SSFRQLIQESSTHMGCGVL 195
:|::..:..| :.:|..:... |.||.....| |..: |.:.|::..||:.:||.:.
Rat 125 -SGRYRSVVDL---VKSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLGCAIH 185
Fly 196 RQRSHMLW---HQQ--FIVCNFA-RRNMPREQVYQVGVAATGCRSGRNPRYPNLC 244
...|..:| .|| ::|||:| :.|...|..|:.|...:.| .|.|...|
Rat 186 TCSSINVWGSTWQQAVYLVCNYAIKGNWIGEAPYKTGKPCSAC----PPSYQGNC 236
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG3640 | NP_611950.1 |
SCP_euk |
65..213 |
CDD:240180 |
42/151 (28%) |
R3hdml | NP_001102432.1 |
SCP |
65..207 |
CDD:294090 |
41/150 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166344654 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
75 |
1.000 |
Inparanoid score |
I5171 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.800 |
|
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