DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and Clec18a

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_038954171.1 Gene:Clec18a / 307851 RGDID:1559899 Length:497 Species:Rattus norvegicus


Alignment Length:183 Identity:42/183 - (22%)
Similarity:71/183 - (38%) Gaps:55/183 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 REARLIPLSNQLQAFIV---HQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCS 114
            ::..::...::.::|::   |  |..|:||...       |..|..:.|...|||||:..|..|.
  Rat    62 KQVPIVQALSRKESFLILTTH--NRLRSQVHPS-------AANMQRMDWSESLAQLAQARAALCG 117

  Fly   115 LSGD-----GCRNTRRFKHVG---QLTGHVIFSAGKHSDLELLRHKISNWFG---QYMRASKDLQ 168
            .|..     ..|||   ..||   ||     ...|..|.:|:    ::.||.   ||...|.:  
  Rat   118 TSATPNLAATLRNT---PDVGWNVQL-----LPMGSASFVEV----VNVWFAEGLQYRHGSAE-- 168

  Fly   169 AADPSSNISSFRQLIQESSTHMGCGVLRQRSHMLWHQQFI--------VCNFA 213
             ...::..:.:.||:..:|:.:|||         |...|:        ||.::
  Rat   169 -CAHNATCAHYTQLVWATSSQLGCG---------WQPCFVDQVATEAFVCAYS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 42/169 (25%)
Clec18aXP_038954171.1 CAP_euk 77..211 CDD:349399 41/166 (25%)
CLECT 361..485 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344566
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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