DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-20

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_507655.1 Gene:scl-20 / 191309 WormBaseID:WBGene00013972 Length:212 Species:Caenorhabditis elegans


Alignment Length:197 Identity:50/197 - (25%)
Similarity:86/197 - (43%) Gaps:27/197 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QAFIVHQVNFYRNQVASGGLSAFG----PARRMASVRWDPELAQLAELAAKRC-SLSGDGCRNTR 124
            |..||...|..|:|:|:|.....|    ||:.|..::|||.||.:|:..|..| ||..|.....|
 Worm    25 QREIVDFHNSLRSQLANGDYVVDGVPKPPAKDMMKMKWDPILAGMAKNNAATCPSLFTDSKMLGR 89

  Fly   125 RFKH------VGQLTGHVIFSAGKHSDLELLRHKISNWFGQYMRASKDLQAADPSSNISSFRQLI 183
            .:.|      .|.|..:.:|:..|..    .:.:...|..|..|...|.:.      ::|..|::
 Worm    90 NYYHRLANVTSGSLDKYALFAVKKWE----RQFQERGWKNQEFRMFGDHRL------LTSATQMV 144

  Fly   184 QESSTHMGCGV-LRQRSHMLW---HQQFIVCNF-ARRNMPREQVYQVGVAATGC-RSGRNPRYPN 242
            ..::.|:|||| :......|:   ::..::|.: ::.|:....:|:.|...:.| .|.:..|...
 Worm   145 WATTRHVGCGVNICDAEKNLFGYRNKVVVICEYQSKGNIHGLPIYKEGPTCSACPASTKCERRSG 209

  Fly   243 LC 244
            ||
 Worm   210 LC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 42/163 (26%)
scl-20NP_507655.1 SCP 23..177 CDD:214553 42/161 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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