DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-17

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:180 Identity:35/180 - (19%)
Similarity:63/180 - (35%) Gaps:37/180 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 NFYRNQVASGGLSAFG----PARRMASVRWDPELAQLAELAAKRCSLSGDG--------CRNTRR 125
            |.:|:.:|.|.....|    ||..:..::|:..:|..|:..|.:|....||        |     
 Worm    32 NEFRSSIAKGTYVTKGLLHAPATNIMKMKWNVTIATAAQNHANKCPKGHDGPLEGVSGEC----- 91

  Fly   126 FKHVGQLTGHVIFSAGKHSDLELLRH----KISNWFGQYMRASKDLQA-ADPSSNISSFRQLIQE 185
                 ..:||:..|.|       :.|    ....|..:|.:...:... :|...|......:|..
 Worm    92 -----MWSGHINASKG-------VNHLGAVAAKAWSSEYTKKGWETDVMSDEFFNSGVGHAIIMT 144

  Fly   186 --SSTHMGCGVLRQRSHMLWHQQFIVCNFARRNMPREQV-YQVGVAATGC 232
              |..::||||...:....:....:||.:........:: |:.|...:.|
 Worm   145 WYSQVNVGCGVKLCQKEGDYQLAIVVCKYWGEGQGNGKIMYESGPTCSAC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 32/158 (20%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 32/158 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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