DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-18

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:177 Identity:30/177 - (16%)
Similarity:55/177 - (31%) Gaps:64/177 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 FYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSGDGCRNTRRFKHVGQLTGHVIF 138
            |:......|..:.:||   ||::.|..|..:                                  
 Worm   106 FWHWSTRPGDFNKYGP---MAALSWIKEFRE---------------------------------- 133

  Fly   139 SAGKHSDLELLRHKISNWFGQYMRASKDLQAADPSSNISSFRQLIQESSTHMGCGV-----LRQR 198
               |..|..:|.:.:   ||               |.:....|::...:..|||.|     :.:|
 Worm   134 ---KFWDSNILTNDL---FG---------------SGVGHATQMVWADTYQMGCAVSHFKEIHKR 177

  Fly   199 SHMLWHQQFIVCNF-ARRNMPREQVYQVGVAATGCRSGRNPRYPNLC 244
            :.....:..:||:: .:.|...|.:|..|...:.|.|.:..:...||
 Worm   178 TGRPITKICVVCHYWPKGNYLNEPIYLEGPPCSKCESKKCDKRTGLC 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 22/144 (15%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 22/144 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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