DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-12

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_504056.1 Gene:scl-12 / 186714 WormBaseID:WBGene00019178 Length:208 Species:Caenorhabditis elegans


Alignment Length:196 Identity:50/196 - (25%)
Similarity:73/196 - (37%) Gaps:38/196 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SNQLQAFIVHQVNFYRNQVASGGLSAFG----PARRMASVRWDPELAQLAELAAKRCSLSGDGCR 121
            |:..|..||...|..|:.:|.|...|.|    ||..|..::||..:|..|:..|..|.       
 Worm    19 SSTAQTAIVKAHNDLRSAIALGNYDAAGTIEPPAANMRKIKWDSTVASSAQQYANTCP------- 76

  Fly   122 NTRRFKHVGQLTGHVIF---SAGKHSDLELLRHKISN----------WFGQYMRASKDLQAADPS 173
                ..|.|...|..::   |:...:.|:......||          |...||.|  ||.    .
 Worm    77 ----DDHSGTEYGENLYWSWSSSAPTSLDKFGVAASNSWEKEFQDYGWESTYMDA--DLF----D 131

  Fly   174 SNISSFRQLIQESSTHMGCGVL---RQRSHMLWHQQFIVCNFARR-NMPREQVYQVGVAATGCRS 234
            |.|....|:....:..:||||.   :..|....::..:||.:.:. ||....:||.|...:.|.|
 Worm   132 SGIGHATQMAWAETNKIGCGVKNCGKDSSMNNMYKVAVVCQYDQAGNMMDSDIYQSGDTCSFCPS 196

  Fly   235 G 235
            |
 Worm   197 G 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 41/167 (25%)
scl-12NP_504056.1 SCP 21..175 CDD:214553 41/170 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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