DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-24

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_507429.1 Gene:scl-24 / 184188 WormBaseID:WBGene00008575 Length:212 Species:Caenorhabditis elegans


Alignment Length:198 Identity:35/198 - (17%)
Similarity:71/198 - (35%) Gaps:48/198 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 NQLQAFIVHQVNFYRNQV---ASGGL---SAFGPARRMASVRWDPELAQLAELAAKRCSLSGDGC 120
            :|..|..:..:.|..|::   ||.||   .:...:..|..:.|:..|....|.....|..:.:  
 Worm    24 HQWNAEAIDNIVFIHNKLRNAASHGLWERYSISKSSNMQLLSWNESLVAEVENEKYYCEPADN-- 86

  Fly   121 RNTRRFKHVGQLTGHVI--FSAGKHSDLELLRHKISNWFGQYMRASKDLQAA---DPSSNISSFR 180
                  |::....|..|  :....:.|::        ..|.....:||...|   :..:..:..|
 Worm    87 ------KNLPIKLGDNIYQYDVNTYDDID--------GVGAMGSINKDTHNALKSEEKATKNRLR 137

  Fly   181 QLIQESSTHMGC-----------GVLRQRSHMLWHQQFIVCNFA--RRNMPREQVYQVGVAATGC 232
            |::...|..:||           |:       .::.:.::|.::  ..|:. ||::..|...:.|
 Worm   138 QMLYSKSKSIGCIYESCDKIDSKGI-------NYNTRLVICKYSPPLENID-EQLFDKGEPCSNC 194

  Fly   233 RSG 235
            .||
 Worm   195 PSG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 27/169 (16%)
scl-24NP_507429.1 CAP_euk 31..174 CDD:349399 26/165 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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