DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-23

DIOPT Version :10

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_499859.3 Gene:scl-23 / 182028 WormBaseID:WBGene00015246 Length:330 Species:Caenorhabditis elegans


Alignment Length:201 Identity:46/201 - (22%)
Similarity:83/201 - (41%) Gaps:34/201 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LSNQLQAFIVHQVNFYRNQVASGGLSA----FGPARRMASVRWDPELAQLAELAAKRCSLSGDGC 120
            |..:||..|:.:.|..|:|||.|..:.    ..||..|..:.||.||...|:..|::|:|..:  
 Worm   117 LPARLQNLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQCNLQKE-- 179

  Fly   121 RNTRRFKHVGQLTGHVIF----------SAGKHSDLELLRHKISNWFGQYMRASKDLQAADPSSN 175
            .:.|:.....::.|...|          |......::.:..:|:      :...|:|:.:...|.
 Worm   180 NSGRQMNGWDEVRGENAFYFRTTDGLDVSGAVLKGIQRMGDEIA------IAGIKNLKLSRYDSR 238

  Fly   176 ISSFRQLIQESSTHMGCGVLR---QRSHMLWHQQF--IVC------NFARRNMPREQVYQVGVAA 229
            |....|::.:.:..:||.|..   ::...|..|::  .||      |..:.:.| ..:|.||..|
 Worm   239 IGHATQILWKETRKLGCAVQECPARQDGSLDGQKYNVAVCKYYPTGNVFKSSTP-TSIYSVGDVA 302

  Fly   230 TGCRSG 235
            :.|..|
 Worm   303 SACSEG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 CAP_euk 65..213 CDD:349399 37/172 (22%)
scl-23NP_499859.3 CAP_euk 122..281 CDD:349399 36/166 (22%)

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