DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-13

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_504055.1 Gene:scl-13 / 178798 WormBaseID:WBGene00019179 Length:208 Species:Caenorhabditis elegans


Alignment Length:203 Identity:50/203 - (24%)
Similarity:81/203 - (39%) Gaps:31/203 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SNQLQAFIVHQVNFYRNQVASGGLSAFG----PARRMASVRWDPELAQLAELAAKRCSLSGDGCR 121
            |:..|..||...|..|:.:|.|...|.|    .|..|..:.||..:|..|:..|       :||.
 Worm    19 SSTAQGQIVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVWDETVAAAAQEYA-------EGCP 76

  Fly   122 NTRRFKHVGQLTGHVIF---SAGKHSDLELLRHKISN-W---FGQYMRASKDLQAADPSSNISSF 179
            :    .|.|...|..::   |:...|.|:......|| |   |.:|...|..|..|..::.|...
 Worm    77 D----DHSGTSYGENLYWSWSSSAPSSLDKFGVAASNSWESEFQKYGWTSTFLDEAGFATGIGHA 137

  Fly   180 RQLIQESSTHMGCGVLR-----QRSHMLWHQQFIVCNF-ARRNMPREQVYQVGVAATGCRSGRN- 237
            .|:....::.:|||:..     .:.:|  ::..:||.: :..||....:||.|...:.|....: 
 Worm   138 TQMAWAETSKIGCGIKNCGKDANKKNM--YKVAVVCQYDSAGNMMDSDIYQQGETCSACSEDASC 200

  Fly   238 PRYPNLCA 245
            .:...|||
 Worm   201 EQDSGLCA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 40/164 (24%)
scl-13NP_504055.1 SCP 21..174 CDD:214553 40/165 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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