DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and scl-3

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_502504.1 Gene:scl-3 / 178252 WormBaseID:WBGene00009896 Length:211 Species:Caenorhabditis elegans


Alignment Length:188 Identity:44/188 - (23%)
Similarity:74/188 - (39%) Gaps:29/188 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QAFIVHQVNFYRNQVASGGLSAFGPARRMAS----VRWDPELAQLAELAAKRCSLSGDGCRNTRR 125
            |.|||...|..|..:|.|...|.|..:...|    ::||..||..|:..|..|.      |....
 Worm    25 QQFIVDLHNKLRTSIAKGTYVAKGTTKAAGSNLLKMKWDTTLATAAQTFANTCP------RGHSN 83

  Fly   126 FKHVGQLTGHVIFSAGKHSDLELLRHKIS-NW---FGQYMRASKDLQAADPSSNISSFRQLIQES 186
            ...||: ..:..:|:...|.:::.....| .|   |.||...:.....|..::.|....|:...:
 Worm    84 AAGVGE-NLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTNTFTQALANTGIGHATQMAWAN 147

  Fly   187 STHMGCGV--------LRQRSHMLWHQQFIVCNF-ARRNMPREQVYQVGVAATGCRSG 235
            :..:||||        |..     :::..:||.: |:.|...:.:|:.|...:.|.:|
 Worm   148 TGLIGCGVKNCGPDPELNN-----YNRAVVVCQYKAQGNYLGQDIYKSGTTCSACPTG 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 38/164 (23%)
scl-3NP_502504.1 SCP 23..176 CDD:214553 38/162 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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