DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3640 and GLIPR1

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_006842.2 Gene:GLIPR1 / 11010 HGNCID:17001 Length:266 Species:Homo sapiens


Alignment Length:261 Identity:59/261 - (22%)
Similarity:92/261 - (35%) Gaps:87/261 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NGTFGLDCGREARLIPLSNQLQAFIVHQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAEL 108
            |..|..||.|               :|  |.:|::|..       .|..|..:.|||.|||:|:.
Human    30 NEDFIKDCVR---------------IH--NKFRSEVKP-------TASDMLYMTWDPALAQIAKA 70

  Fly   109 AAKRCSLSGDGCRNTR---------RFKHVGQ--LTGHV-IFSAGKHSDLELLRHKISNWFGQYM 161
            .|..|..|    .|||         .|..:|:  .||.| |||...         .|:||:    
Human    71 WASNCQFS----HNTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSS---------AITNWY---- 118

  Fly   162 RASKDLQAADPSSNI-----SSFRQLIQESSTHMGCGV-----------LRQRSHMLWHQQFIVC 210
               .::|..|..:.|     ..:.|::...|..:||.|           |...:|       .:|
Human   119 ---DEIQDYDFKTRICKKVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAH-------FIC 173

  Fly   211 NFARRNMPREQVYQVGVAATGCRSGRNPRYPNLCALQEEYDVNAVDRFHS----KRPLRIRFKYS 271
            |:..........|:.|...:.| ...:....|||..::.   :.|.|::|    ..|:..|.:|:
Human   174 NYGPGGNYPTWPYKRGATCSAC-PNNDKCLDNLCVNRQR---DQVKRYYSVVYPGWPIYPRNRYT 234

  Fly   272 A 272
            :
Human   235 S 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 42/175 (24%)
GLIPR1NP_006842.2 SCP_GLIPR-1_like 32..178 CDD:240185 46/196 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151243
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.