DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and glipr1a

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_017210734.1 Gene:glipr1a / 108179203 ZFINID:ZDB-GENE-110309-2 Length:269 Species:Danio rerio


Alignment Length:191 Identity:43/191 - (22%)
Similarity:72/191 - (37%) Gaps:20/191 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QAFI---VHQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSGD-GCRNTRR 125
            :|||   |.:.|..|:.|:.       .|..|..:.||..||..|...|:.|....: ..|..:|
Zfish    29 RAFIDECVREHNQNRSSVSP-------TAANMRYMTWDAALAVTARAWARFCLFKHNIHLREAKR 86

  Fly   126 FKHVGQLTGHVIFSAGKHSDLELLRHKISNWFGQYMRASKDLQAADPSSNISSFRQLIQESSTHM 190
            ........|..|::...:|.. .::..:.:|..:....:.:....:.......:.|::...|..:
Zfish    87 VHPTFTTVGENIWAGAPYSRF-TVKSAVFSWVNELKDYNYNNNQCNDKKVCGHYTQVVWADSYKV 150

  Fly   191 GCGVLR-----QRSHMLWHQQFI-VCNFARR-NMPREQVYQVGVAATGCRSGRNPRYPNLC 244
            ||.|..     ..:|....|..| |||:|.. |......|:.|.:.:|| .|.:....|||
Zfish   151 GCAVQTCPNGVAETHFSNIQGVIFVCNYATAGNFAGRSPYKQGASCSGC-GGSDKCERNLC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 33/157 (21%)
glipr1aXP_017210734.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I5251
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.970

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