DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and crispld2

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:290 Identity:62/290 - (21%)
Similarity:107/290 - (36%) Gaps:88/290 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 REARLIPLSNQLQAFIVHQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSG 117
            |..|.|..|::.:...:|  |..|.:|       :..|..|..:.||.||.:.|...|::|    
Zfish    51 RTRRAIEWSDREEILKLH--NKLRGEV-------YPTASNMEYMIWDDELERSATSWAEQC---- 102

  Fly   118 DGCRNTRRFKHVGQLTGHVIFSAGKHSDLELLRHK-----ISNWFGQYMRASKDLQAADP----- 172
                   :::|..|   .::.|.|::..:...|::     :..|:.:.    ||.....|     
Zfish   103 -------QWEHGPQ---DLLMSIGQNLAVHWGRYRSPAYHVQAWYDEV----KDYTYPYPHECNP 153

  Fly   173 -------SSNISSFRQLIQESSTHMGCGVLRQRSHM---------LWHQQ-FIVCNFA-RRNMPR 219
                   ....:.:.||:..::..:||.|     |:         :|... ::|||:: :.|...
Zfish   154 WCPERCSGPMCTHYTQLVWATTNRVGCAV-----HVCPRMNVWGEIWENAVYLVCNYSPKGNWIG 213

  Fly   220 EQVYQVGVAATGCRSGRNPRY-----PNLC-----ALQEEYDVNAVDRFHSKRPLRIRF-----K 269
            |..||.|...:.|    .|.|     .|||     ..||..::|.|::  .:.||:.|.     :
Zfish   214 EAPYQHGRPCSQC----PPSYGGVCRDNLCYKRDSERQETPEMNEVEK--PQEPLQPRTTPPKPQ 272

  Fly   270 YSASHPSKVLGA-------DRDVAFHPNIK 292
            ...|.|.|...|       .|:.....|||
Zfish   273 PKPSSPKKPANAKPSSPKTTRNTYLAQNIK 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 32/174 (18%)
crispld2XP_003199065.1 SCP_euk 61..206 CDD:240180 32/176 (18%)
LCCL 299..382 CDD:128866 3/4 (75%)
LCCL 402..495 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585817
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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