DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and crispld1

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_002937123.2 Gene:crispld1 / 100490431 XenbaseID:XB-GENE-989389 Length:514 Species:Xenopus tropicalis


Alignment Length:252 Identity:51/252 - (20%)
Similarity:89/252 - (35%) Gaps:79/252 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 REARLIPLSNQLQAFIVHQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSG 117
            |..|.|..|:......:|  |..|.:|       :.||..|..:.||.||.:.||..|:.|    
 Frog    52 RGKRAITESDMKLILDLH--NKLRGEV-------YPPASNMEFMIWDVELERSAEAWAETC---- 103

  Fly   118 DGCRNTRRFKHVGQLTGHVIFSAGKHSDLELLRHKISNWFGQYMRASKDLQA------------- 169
                               ::..|....|.::...:...:|:|...:..:||             
 Frog   104 -------------------LWEHGPADLLPVIGQNLGAHWGRYRPPTYHVQAWYDEVRDYTFPYP 149

  Fly   170 --ADP------SSNI-SSFRQLIQESSTHMGCGVLRQRSHMLWHQ-----QFIVCNFA-RRNMPR 219
              .||      |..: :.:.||:..:|:.:||.:....:..:|.|     .::|||:: :.|...
 Frog   150 QECDPYCPFRCSGPVCTHYTQLVWATSSRIGCAINLCHNMNVWGQIWPKAIYLVCNYSPKGNWWG 214

  Fly   220 EQVYQVGVAATGC--------------RSGRNPRYPNLCALQE-EYDVNAVDRFHSK 261
            ...|:.|...:.|              :.|.:..||    |.| |.:.|.::...||
 Frog   215 HAPYKHGHPCSACPPSYGGGCKDNLCYKDGSDLHYP----LPEPEEETNEIEGQSSK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 34/174 (20%)
crispld1XP_002937123.2 CAP_CRISPLD1 62..207 CDD:349407 34/176 (19%)
LCCL 304..388 CDD:128866
LCCL 407..506 CDD:367672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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