DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3640 and LOC100490275

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_031754789.1 Gene:LOC100490275 / 100490275 -ID:- Length:291 Species:Xenopus tropicalis


Alignment Length:224 Identity:49/224 - (21%)
Similarity:81/224 - (36%) Gaps:63/224 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 WCP-----------RSTDHVACNNNGTFGLDCGREARLIPLSNQLQAFIVHQVNFYRNQVASGGL 84
            |.|           |..|.....||..|..|                 :|:..|..||:      
 Frog     2 WLPQLMLVVSVCGARQLDPTPAYNNERFVTD-----------------LVNAHNDIRNE------ 43

  Fly    85 SAFG-PARRMASVRWDPELAQLAELAAKRCSLSGDGCRNTR----RFKHVGQLTGHVIFSAGKHS 144
              || .|..|..:.||..||:||:.....|....:...|..    |||.:|:     ....|...
 Frog    44 --FGKQAANMLHMSWDVGLAKLAQAWTINCKKVPNPHLNKESIYPRFKQIGE-----NLYMGPSI 101

  Fly   145 DLELLRHKISNW--FGQYMRASKDLQ--AADPSSNISSFRQLIQESSTHMGCGVLRQRSHMLWHQ 205
            |:..:   ::||  .|.:.    ||:  :..|..:.|.|.|::..::..:|||.    ::.....
 Frog   102 DIFKI---VTNWGLEGNFY----DLKNNSCQPGKDCSHFTQIVWANTYKVGCGA----AYCAHKV 155

  Fly   206 QFIV-CNFA-RRNMPREQVYQVGVAATGC 232
            .::| |.:. |.|:..:..:.:||..:.|
 Frog   156 AYVVSCTYGPRGNLLGQVPFILGVKCSKC 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 36/157 (23%)
LOC100490275XP_031754789.1 CAP 28..167 CDD:412178 38/179 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I5157
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.060

Return to query results.
Submit another query.