DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3640 and glipr2

DIOPT Version :9

Sequence 1:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001107504.1 Gene:glipr2 / 100135358 XenbaseID:XB-GENE-5758336 Length:441 Species:Xenopus tropicalis


Alignment Length:191 Identity:35/191 - (18%)
Similarity:68/191 - (35%) Gaps:41/191 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YCQEHWCPRSTDHVACNNNGT---------FGLDCGREARLIPL--SNQLQAFIVHQVNFYRNQV 79
            |.|::..|:.|   ..:|.||         .|.. |.::.|.|.  |.:.....:...|.||::.
 Frog    74 YFQKNVLPKGT---PVSNTGTSPTARGTSYLGTR-GTDSALSPTADSREFALEFLKANNVYRSRH 134

  Fly    80 ASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSGDGCRNTRRFKHVGQLTGHVIFSAGKHS 144
            .:..|.......:.|. ||...|.                  |.:..||.....|..|::.....
 Frog   135 GAKPLQLNSKISQEAQ-RWAEHLL------------------NLKNLKHSDTSHGENIWAKSGGP 180

  Fly   145 DLELLRHKIS-NWFGQYMRASKDLQAADPSSNISS--FRQLIQESSTHMGCGVLRQRSHML 202
            .:.:...::: :|:    :..|:...:.|.:...:  |.|::.::|..:|.|:......||
 Frog   181 SITVTGQEVADSWY----KEEKNYNFSKPGNKAKTGHFTQMVWKASKEVGVGLASSGKGML 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3640NP_611950.1 SCP_euk 65..213 CDD:240180 23/141 (16%)
glipr2NP_001107504.1 SCP <3..69 CDD:294090
SCP_GAPR-1_like 118..249 CDD:240182 23/143 (16%)
SCP_GAPR-1_like 295..426 CDD:240182
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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