DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp9c1 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_523850.1 Gene:Cyp9c1 / 37941 FlyBaseID:FBgn0015040 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus


Alignment Length:560 Identity:129/560 - (23%)
Similarity:202/560 - (36%) Gaps:159/560 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LSIFVAFIGLLLYKWSVYTFGYFSKRGVAHEKPI-------PLLGNIPWSVLMGKESYIKHSIDL 63
            |.:|:|.:.|    |.:|.   .|.|..:...|:       |..|.....||..::         
Mouse    18 LLLFLAALKL----WDLYC---VSSRDRSCALPLPPGTMGFPFFGETLQMVLQRRK--------- 66

  Fly    64 HLRLKQHKVYGVFNLRDPLY--YLSDPELIRQVGIKNFDTFT--NHR-KGITEGFNDTSVISKSL 123
            .|::|:.| ||.      :|  :|.....:|.:|..|.....  .|| ..:....:..:::....
Mouse    67 FLQMKRRK-YGF------IYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPASVRTILGAGC 124

  Fly   124 LS-LRDRRWKQMRSTLTPTFTSLKIRQMFELIHFCNV-----EAVDFVQRQLDAGTSEL----EL 178
            || |.|...||.:..:...|:    |:..:    |.|     |....:::.|..|...|    |:
Mouse   125 LSNLHDSSHKQRKKVIMQAFS----REALQ----CYVPVIAEEVSSCLEQWLSCGERGLLVYPEV 181

  Fly   179 KDFFTRYTNDVIATAAFGIQ---------VNSFKDPNNEFFSIGQRISEFTFWGGLKVMLYILMP 234
            |....|....::.....|..         |.:|::.....||:                      
Mouse   182 KRLMFRIAMRILLGCEPGPAGGGEDEQQLVEAFEEMTRNLFSL---------------------- 224

  Fly   235 KLMKALRVPVMDMNNVDYFKKLVFGAMKYRKEQSIVRPDMIHLLMEAQ-----RQFKA-EQEGSA 293
                .:.||         |..|..| :|.|        ::||..:|..     |:.:| |.:|..
Mouse   225 ----PIDVP---------FSGLYRG-VKAR--------NLIHARIEENIRAKIRRLQATEPDGGC 267

  Fly   294 ESAAQ------QDKAEFNDDDLLAQC---LLFFSAGFETVATCLSFTSYELMMNPEVQEKLLAEI 349
            :.|.|      .::.|..|...|.|.   |||  .|.||.|:..:.....|.:.|.|.:|:..||
Mouse   268 KDALQLLIEHSWERGERLDMQALKQSSTELLF--GGHETTASAATSLITYLGLYPHVLQKVREEI 330

  Fly   350 ----LAVKEQLGEKPLDYDTLMGMKYLNCVVSESLRKWPPAFIVDRMCGSDFQLKD---EEGEVV 407
                |..|.....| ||.:||..:||..||:.|:||..||.....|:....|:|..   .:|..|
Mouse   331 KSKGLLCKSNQDNK-LDMETLEQLKYTGCVIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNV 394

  Fly   408 VNLREDDLVHINVGALHHDPDNFPEPEQFRPERFDEEHKHEIRQFTYLPFGVGQRSCIGNRLALM 472
            :         .::...|...|.|...|:|.|:||...|..:..:|:::|||.|.|||:|...|.:
Mouse   395 I---------YSICDTHDVADIFTNKEEFNPDRFIVPHPEDASRFSFIPFGGGLRSCVGKEFAKI 450

  Fly   473 EVKSLIFQLVLRYH-----------------LKPTDRTPA 495
            .:|  ||.:.|..|                 :.|.|..||
Mouse   451 LLK--IFTVELARHCDWQLLNGPPTMKTSPTVYPVDNLPA 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp9c1NP_523850.1 p450 37..514 CDD:299894 121/529 (23%)
Cyp26a1NP_031837.2 p450 43..491 CDD:299894 121/528 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.