DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42360 and Zc3h12b

DIOPT Version :10

Sequence 1:NP_611946.2 Gene:CG42360 / 37937 FlyBaseID:FBgn0259742 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001030079.2 Gene:Zc3h12b / 547176 MGIID:2442133 Length:835 Species:Mus musculus


Alignment Length:461 Identity:119/461 - (25%)
Similarity:187/461 - (40%) Gaps:131/461 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 TVIAAQETGASSSNTKMPKQAVKHKGFKKIRGPKPKNGQKRLKRNATQKKALNREMVSKFLNSIK 115
            |..||.||      .||.|.|.|.:      ..:||......:.||..::..|.|       |..
Mouse     2 TATAAVET------PKMEKSASKEE------KQQPKQEDSTDRGNADPEEWANSE-------SDP 47

  Fly   116 KKYALQKNHHIKRRLD--FRRRESPEKKN-------ALPKPKFYNPNKNDNKKEEGEIVTELDSS 171
            ::.:.:..|...:..|  .:::|.|.|.:       .|.:|.|    ...:..::|::..|.:..
Mouse    48 EQMSCKSGHTSYQATDIQLKKKEMPSKPHRPLCRSPCLDRPSF----SQSSILQDGKLDLEKEYQ 108

  Fly   172 DDDDCVL-LDTPNESI-SILDDEDDEPSTSDQLLKQIVMDCNGEAALRITPKTENAVLYSTIGKQ 234
            ...|..| |....|.| |:|:....|...:|.|.:.:                       .:|.:
Mouse   109 AKMDFALKLGYAEEQIQSVLNKLGPESLINDVLAELV-----------------------RLGNK 150

  Fly   235 NSSDSIINLDDTFEAVPSLVVDSNDSVIYIEDTTGEDFIPIPSYSPPFREGEKQRRARPAKTPNK 299
            ..|::.:||        ||::....|                              :|...:|  
Mouse   151 GDSEAQVNL--------SLLLPRGAS------------------------------SREIASP-- 175

  Fly   300 KTARMNDSFFTTEEKKKLGDYNTNTFNPTEEAGEASNKPKTNKRFVIIDGSNVAFAHGNSNVFSS 364
                          :..|.|...|:               .|.|.::|||||||.:|||...||.
Mouse   176 --------------ELSLEDEIDNS---------------DNLRPIVIDGSNVAMSHGNKEEFSC 211

  Fly   365 EGIKYCLQYFEKMGH-EVKAVVPMFRKNNFKSSNP----ELLDKLHKEGKIVFTPCKNIPGQITS 424
            .||:..:.:|...|| ::...||.:||...:...|    ::|.||.||..:||||.:.:.|:...
Mouse   212 RGIQLAVDWFLDKGHKDITVFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVV 276

  Fly   425 SYDDRFILQLAYEKNAAVVSNDNYRDLINENPAFKLIVENRVLGYSWCDNIFILPKDPYGRWGPT 489
            .||||||::||::.:..:|||||||||..|.|.:|..:|.|:|.||:.::.|:.|.||.||.||:
Mouse   277 CYDDRFIVKLAFDSDGIIVSNDNYRDLQVEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPS 341

  Fly   490 LDEILR 495
            |:..||
Mouse   342 LENFLR 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42360NP_611946.2 PIN_Zc3h12a-N4BP1-like 345..469 CDD:350286 55/128 (43%)
Zc3h12bNP_001030079.2 UBA_6 107..148 CDD:407876 10/63 (16%)
PIN_Zc3h12-like 192..322 CDD:350296 55/129 (43%)
zf-CCCH_2 359..377 CDD:464217
Regnase_1_C 795..829 CDD:465803
Blue background indicates that the domain is not in the aligned region.

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