DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42360 and Ccdc59

DIOPT Version :10

Sequence 1:NP_611946.2 Gene:CG42360 / 37937 FlyBaseID:FBgn0259742 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001101560.1 Gene:Ccdc59 / 314799 RGDID:1311912 Length:240 Species:Rattus norvegicus


Alignment Length:168 Identity:31/168 - (18%)
Similarity:66/168 - (39%) Gaps:47/168 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GASSSNTKMPKQAVKHKGFKKIRGPKPKNGQKRLKRNATQKKALNREMVSKFLNSI--------K 115
            |..||..:....|.:.:|..::|... :||::|..|...|:         .||.|:        :
  Rat     4 GRPSSRLRTGGFAARGEGTPQVRFGN-QNGKRRTWRPNHQQ---------AFLGSVREGQGFAFR 58

  Fly   116 KKYALQKNHHIKRRLDFRRRESPEKKNALPKPKF-------YNPNKNDNKKEEGEIVTELDSSDD 173
            :|..:|:|:   ::|.::.:::|..:.:..:..:       |...:...:|::.::...|.... 
  Rat    59 RKLKIQQNY---KKLLWKVKKAPASQGSQFEDHYPEHLKHLYLAEEERLRKQQRKVDLALSEGQ- 119

  Fly   174 DDCVLLDTP-------------NESISILDDEDDEPST 198
                 ||.|             .|..|:...:.:||||
  Rat   120 -----LDQPLPEEEGNTEQAVSEEQSSVFQPQPEEPST 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42360NP_611946.2 PIN_Zc3h12a-N4BP1-like 345..469 CDD:350286
Ccdc59NP_001101560.1 rRNA_processing <145..239 CDD:400708 4/8 (50%)
Blue background indicates that the domain is not in the aligned region.

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