DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42360 and Nynrin

DIOPT Version :10

Sequence 1:NP_611946.2 Gene:CG42360 / 37937 FlyBaseID:FBgn0259742 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001035161.1 Gene:Nynrin / 277154 MGIID:2652872 Length:1840 Species:Mus musculus


Alignment Length:47 Identity:12/47 - (25%)
Similarity:20/47 - (42%) Gaps:7/47 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ASPSHFLWSQQFSSILASNGHNVTLLNIYKEGKQN-----NLHFLKL 79
            |:||....|......||.  ....||:..::||.:     .||:.::
Mouse   156 AAPSQSCLSHTQRMQLAQ--RRFVLLDRNRDGKLSRRDLRKLHYKRM 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42360NP_611946.2 PIN_Zc3h12a-N4BP1-like 345..469 CDD:350286
NynrinNP_001035161.1 KH-I_N4BP1_like_rpt1 12..73 CDD:411808
KH-I_NYNRIN_like 75..140 CDD:411905
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..327
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 427..449
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 545..564
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..615
PIN_N4BP1-like 743..867 CDD:350295
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 918..968
RT_RNaseH_2 1073..1173 CDD:465567
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1149
Integrase_H2C2 1479..1532 CDD:465569
Blue background indicates that the domain is not in the aligned region.

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