DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and MGC146893

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001072248.1 Gene:MGC146893 / 779697 -ID:- Length:180 Species:Xenopus tropicalis


Alignment Length:193 Identity:57/193 - (29%)
Similarity:84/193 - (43%) Gaps:24/193 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   440 MEYHDVSKHVPKSEFKYSCPECNKKIPTERKLKEHLRYMHDPEAAIICDKCGKTLRSQTNLKKHH 504
            ||...|::|        .||||.|:...:.||..|.| :|..|...:|.:|||..|.:.:|.:|.
 Frog     8 MELPSVAQH--------ECPECGKRFSYKNKLIIHYR-VHTGEKPFMCTECGKKFRRKQDLTEHQ 63

  Fly   505 ELEHSEKPRPKPDPVQCEICGTWLRHLSGLKQHMKTVH---EPPGDEHRCHICNKTSTNSRALKR 566
            .:...||      |..|..|.......|.|..|.: :|   :|    ..|..|.|:.::..:::.
 Frog    64 LIHTGEK------PFMCTECDKQFNKRSNLLSHQR-IHTGVKP----FVCMECGKSFSDKSSIQN 117

  Fly   567 HIYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLH 629
            | ...|..|:.|.|..|.|.|.....|..|...||||..:.|.:|..:|....|:.||:.|:|
 Frog   118 H-QRIHTGEKPFSCTECGKRFTTKSQLSSHYMVHTGEKPFACADCGKSFVLKGNLTKHQTRIH 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368
LIM <361..407 CDD:413332
C2H2 Zn finger 365..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 427..443 CDD:275368 2/2 (100%)
COG5236 <455..>574 CDD:227561 33/121 (27%)
C2H2 Zn finger 458..476 CDD:275368 8/17 (47%)
C2H2 Zn finger 487..507 CDD:275368 7/19 (37%)
C2H2 Zn finger 521..540 CDD:275368 5/18 (28%)
C2H2 Zn finger 551..572 CDD:275368 4/20 (20%)
C2H2 Zn finger 580..600 CDD:275368 6/19 (32%)
C2H2 Zn finger 608..629 CDD:275368 7/20 (35%)
MGC146893NP_001072248.1 COG5048 <5..166 CDD:227381 51/178 (29%)
C2H2 Zn finger 18..38 CDD:275368 9/20 (45%)
C2H2 Zn finger 46..66 CDD:275368 7/19 (37%)
C2H2 Zn finger 74..94 CDD:275368 5/20 (25%)
SUF4-like 98..>150 CDD:411020 14/56 (25%)
C2H2 Zn finger 102..123 CDD:411020 4/21 (19%)
C2H2 Zn finger 102..122 CDD:275368 4/20 (20%)
C2H2 Zn finger 130..150 CDD:411020 6/19 (32%)
C2H2 Zn finger 130..150 CDD:275368 6/19 (32%)
C2H2 Zn finger 158..179 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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