DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and REST

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_005603.3 Gene:REST / 5978 HGNCID:9966 Length:1097 Species:Homo sapiens


Alignment Length:570 Identity:126/570 - (22%)
Similarity:207/570 - (36%) Gaps:149/570 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 EVNELEPLPKVELLEDPVKTEIRTAPKRLGVPNEGSPHSKRRIKNELPVDSDSDAPLADFLNSDS 182
            ::.:|..|.|.||          .||:.:.:.|             :.:..:.:....|:|..:.
Human    29 DMYDLHDLSKAEL----------AAPQLIMLAN-------------VALTGEVNGSCCDYLVGEE 70

  Fly   183 KRSS----VGPAKNSEANKGRQLRRSAR-RGRPPKAKPESAPSPKKELDSEDGEENARDNN-DME 241
            ::.:    ||....|::.:|..|..||. :|.|                  .|.||....: ::.
Human    71 RQMAELMPVGDNNFSDSEEGEGLEESADIKGEP------------------HGLENMELRSLELS 117

  Fly   242 FVAPEAVLGTDDSSSSSSESSG-EDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVR 305
            .|.|:.|.          |:|| .|...|..|:.||...||        .|....:.||      
Human   118 VVEPQPVF----------EASGAPDIYSSNKDLPPETPGAE--------DKGKSSKTKP------ 158

  Fly   306 LSREEIERRKLQQDEYDEIILQFFKKFPCSLCNLLVQNFADMRRHQRVSHNIESGYIECCGRKFH 370
                                      |.|..|....::......|.|| |:.:..::|....|..
Human   159 --------------------------FRCKPCQYEAESEEQFVHHIRV-HSAKKFFVEESAEKQA 196

  Fly   371 LRK----ALAEHVLVHKNPDHFMCSQCGRVFQDSRALEVHEQTHTNPEVKAEPKEKRIYQCEKCP 431
            ..:    :.||.....|.|  ..|.:||  :..:|  ..|...|.....:|...| |:|:|..| 
Human   197 KARESGSSTAEEGDFSKGP--IRCDRCG--YNTNR--YDHYTAHLKHHTRAGDNE-RVYKCIIC- 253

  Fly   432 KSFTTKAAMEYH---DVSKHVPKSEFKYSCPECNKKIPTERKLKEHLRYMHDPEAAIICDKCGKT 493
             ::||  ..|||   .:..|.|:.  .|:|.:||.....:....:|:| .|..|....|:.|..:
Human   254 -TYTT--VSEYHWRKHLRNHFPRK--VYTCGKCNYFSDRKNNYVQHVR-THTGERPYKCELCPYS 312

  Fly   494 LRSQTNLKKHHELEHSEKPRPKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPGDEHRCHICNKTS 558
            ...:|:|.:|......||      |.:|:.|.....:...:.:|.:.||..|...:..|...||:
Human   313 SSQKTHLTRHMRTHSGEK------PFKCDQCSYVASNQHEVTRHARQVHNGPKPLNCPHCDYKTA 371

  Fly   559 TNSRALKRHIYHNHLCERKFKCGMCEKAFKRPQDLREH-TSTHTGEVLYTCPNCPMTFFSNANMY 622
            ..|. .|:|: ..|:..|:|.|.:|:.|..:..:|:.| .|.|.     ||||..|. .|...:.
Human   372 DRSN-FKKHV-ELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHP-----TCPNKTMD-VSKVKLK 428

  Fly   623 KHRQRLHRAEWEADRKKPLPPNIMKISQGATTAMKKRQTSGALFPQSEQK 672
            |.::|      |||    ||.||    ....|.:::.:..|.:..:..:|
Human   429 KTKKR------EAD----LPDNI----TNEKTEIEQTKIKGDVAGKKNEK 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 5/20 (25%)
LIM <361..407 CDD:413332 10/49 (20%)
C2H2 Zn finger 365..382 CDD:275368 3/20 (15%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
C2H2 Zn finger 427..443 CDD:275368 5/15 (33%)
COG5236 <455..>574 CDD:227561 29/118 (25%)
C2H2 Zn finger 458..476 CDD:275368 4/17 (24%)
C2H2 Zn finger 487..507 CDD:275368 5/19 (26%)
C2H2 Zn finger 521..540 CDD:275368 3/18 (17%)
C2H2 Zn finger 551..572 CDD:275368 6/20 (30%)
C2H2 Zn finger 580..600 CDD:275368 6/20 (30%)
C2H2 Zn finger 608..629 CDD:275368 7/20 (35%)
RESTNP_005603.3 Interaction with SIN3A. /evidence=ECO:0000269|PubMed:10734093 32..122 23/130 (18%)
Interaction with SIN3B. /evidence=ECO:0000269|PubMed:16288918 43..57 3/26 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..103 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..159 12/71 (17%)
Interaction with ZFP90. /evidence=ECO:0000269|PubMed:21284946 145..418 78/340 (23%)
Required for binding to the neuron-restrictive silencer element. /evidence=ECO:0000250|UniProtKB:Q8VIG1 201..212 2/10 (20%)
C2H2 Zn finger 218..238 CDD:275368 6/23 (26%)
C2H2 Zn finger 250..270 CDD:275368 7/23 (30%)
C2H2 Zn finger 278..298 CDD:275368 5/20 (25%)
zf-H2C2_2 290..315 CDD:463886 6/25 (24%)
zf-H2C2_5 304..328 CDD:404746 5/23 (22%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
zf-H2C2_2 318..343 CDD:463886 7/30 (23%)
C2H2 Zn finger 334..355 CDD:275368 3/20 (15%)
C2H2 Zn finger 363..383 CDD:275368 6/21 (29%)
zf-H2C2_5 363..383 CDD:404746 6/21 (29%)
C2H2 Zn finger 391..407 CDD:275368 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..642 2/13 (15%)
PRK10263 <599..>767 CDD:236669
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 774..837
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 853..938
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 961..1049
Interaction with RCOR1. /evidence=ECO:0000269|PubMed:10449787 1009..1087
Blue background indicates that the domain is not in the aligned region.

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