DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4707 and znf1068

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001104669.1 Gene:znf1068 / 569852 ZFINID:ZDB-GENE-080215-12 Length:419 Species:Danio rerio


Alignment Length:306 Identity:89/306 - (29%)
Similarity:132/306 - (43%) Gaps:29/306 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 KKFPCSLCNLLVQNFADMRRHQRVSHNIESGY-IECCGRKFHLRKALAEHVLVHKNPDHFMCSQC 393
            |.:.|..|....::..:::.|.| :|..|..| .:.||:.|:....||.|:.:|.....:.|.||
Zfish   135 KPYSCPQCGKSFKHNGNLKVHMR-THTGERPYTCQQCGQCFYTTGNLAAHMRIHTGERPYTCQQC 198

  Fly   394 GRVFQDSRALEVHEQTHTNPEVKAEPKEKRIYQCEKCPKSFTTKAAMEYHDVSKHVPKSEFKYSC 458
            |:.|..|..|..|.:.||.         :|.|.|::|.|||...|.:..|   ..:...|..|||
Zfish   199 GKSFYQSANLAAHMRIHTG---------ERPYTCQQCGKSFYQSANLVVH---MRIHTGERPYSC 251

  Fly   459 PECNKKIPTERKLKEHLRYMHDPEAAIICDKCGKTLRSQTNLKKHHELEHSEKPRPKPDPVQCEI 523
            |:|.|.......|:.|:| .|:...:..|.:|||:...:.:|..|..:...||      |..|..
Zfish   252 PQCGKSFKQNSNLEAHIR-THNGGRSFTCPQCGKSFAQKQDLDLHMRIHTGEK------PYTCTE 309

  Fly   524 CGTWLRHLSGLKQHM--KTVHEPPGDEHRCHICNKTSTNSRALKRHIYHNHLCERKFKCGMCEKA 586
            ||...|..|.|..||  .|..:|    ..|..|.|:.|...:||.|: :.|.....|.|..|.|:
Zfish   310 CGKSFRCKSALNNHMISHTGEKP----FTCAQCGKSFTTKTSLKNHM-NGHTGTIVFTCDQCGKS 369

  Fly   587 FKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAE 632
            ..|...:|.|..||:||..:.|..|...|....::..| .:||..:
Zfish   370 LTRKDTIRNHMKTHSGEDGFRCSECGKGFKYKKSLNTH-IKLHNGD 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 4/20 (20%)
LIM <361..407 CDD:413332 15/46 (33%)
C2H2 Zn finger 365..382 CDD:275368 6/16 (38%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 427..443 CDD:275368 6/15 (40%)
COG5236 <455..>574 CDD:227561 37/120 (31%)
C2H2 Zn finger 458..476 CDD:275368 6/17 (35%)
C2H2 Zn finger 487..507 CDD:275368 6/19 (32%)
C2H2 Zn finger 521..540 CDD:275368 8/20 (40%)
C2H2 Zn finger 551..572 CDD:275368 7/20 (35%)
C2H2 Zn finger 580..600 CDD:275368 6/19 (32%)
C2H2 Zn finger 608..629 CDD:275368 4/20 (20%)
znf1068NP_001104669.1 C2H2 Zn finger 83..103 CDD:275368
COG5048 107..>411 CDD:227381 87/301 (29%)
C2H2 Zn finger 111..131 CDD:275368
C2H2 Zn finger 139..159 CDD:275368 4/20 (20%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 7/22 (32%)
C2H2 Zn finger 251..271 CDD:275368 7/20 (35%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 7/20 (35%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.